Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4027g00011 ATGTCGACTTTTACAACTTCTTCCAAAGTTCCGCAGGAAAAATATGATGTTTTTGTTAGTTTTAGAGGTTCAGACATTAGACGTGGGTTTCTTAGCCATTTGAAAAAGCAGTTACGGCTAAAGGGCATAGATGTGTATGAAGATGAGAGGTTAGAAAGAGGAAATAAAATATCATCTGCGCTTTTGAAAGCAATAGAAAGATCAAGAATTGCGCTGGTGATATTCTCAAAAGACTATGCTTCTTCAAGGTGGTGCTTAGAAGAGTTAGAAAAAATCATGGAATGCAAGCGAGCCAATAATCAAATTGTAATCCCAGTTTTCTATAATGTAGACCCATCACATGTTAGGCATCAAGAAGGATCTTATGCAGATTCATTTTCTCAGCACCAGCAGAAGTTTAAAGACAACTTATTGCAAGTTTGGAGATCTGTCTTGAAAGAAACTGCAAACTTATCTGGCTATTATCACTCCTCAGATTTTCAAAATGAATATGATCTTATTGAGGGAATAATCAAAGATGTATTGAAAAAGGTAGAACATAAAGACACAATGGAGCCAAAAATCCTCATTGGAATTGAGGAAAATTTGCCTACTATTGAATCATTTATGAAAGATGACTCACAAGAAGTTAGACTTCTTGGAATTTGGGGTAAGGGAGGGATAGGTAAAACGACCTTAGCTCGTGCTGCATTTGATAAATTTTCCCACCAATTTGATAGTTCTTACTTTGCAGCAAATGTGAGAGAGGAATCGAAAAAGATTGGATTGACTTGTTTACTTGAAAAAATTCTCATTGTTCTACTAAACGAAGAAAATCTCACAATGGTTGGAATGCCTGATATTCAAAGGAGGCTACATCGAACAAGAGTTCTTCTAGTGCTTGATGACGTAGATACTCCCAGCCAATTACAATATCTTATTGAAGAAAATCTTTCATTGGAACCAAGTAGCAAAGTTATCATAACAAGTAGAGACAAACATGTTCTTGTTAGTGGAGGAGTTCATGAAGTACATCAAGTGAAAGAATTAAACAATGAAGAGTCGCTTCAACTTTTCTGTCGGCAAGCTTTCAAGCAAGGCCATCCTAAACAAGGATATGAAAAGTTATCAGTACAGGTAATTGAATATGCAAAAGGTCTTCCCCTGGCATTAAAAGTTTTGGGTTCATATTTGAACTCAAGAAATACAAAAGCATGGGAGAGTGCCCTTAAAAAATTGAGAAAGTATCCAAATAGGGAAATTCAGACTGTATTGAGGGTGAGTTATGATGGACTTGATATACCAGAAAAGGAACTATTTTTAAATATTGCATTCTTCTTCAGGGGAGAAAAGAAAGAAGATATTATGAGGGTGCTAGATGCTTGTAATGATGACCTCTACGTGGACATTGGAATAGATAGGCTTCTAGATAAAGCACTCATAACTATTTCAAGTGGTAGTAGAGTAGAAATTCATGATATGCTACAAGAAATGGCTGAAGAAATAGTTCGTGAGAAATCTAGAGAGCATCCTGAAAGTCGAAGTCGATTAAATGATGCAAAAGAAATTCAAGATATACTGGAAAATAACAAGGGAACTTATGCAATTAAAGGCATTACACTGATCCAAAATGACAAATCAACGCAACTTCCTTTTGGTCTGGAGTCACTTCCTAATAAACTGAGGTTTTTTTGTTGGGACCATTATCCTCTGAAGACCCTACCGTTGGATTTTTGTACTAAAAAACTCGTTGAAATCCAAATGGAGGGTAGCCAAATTGTAAAACTATGGGATGGTGTGCAGGATCTTATGAATTTGAAGAAAATAAATCTGGGCTCTTCCCAGTTAAAGGAGTTGCCTGATTTCTCCATGGCACAAAATCTTGAAATAATGGATCTTCGATATTGTGGATGTTTATGTAGTATTCATCCATCAATCTTGTCTCTTCCTAAACTTGTTTCTCTGAATCTAGAGGAGTGCCACAAACTAACAAATCTTCACGGGGATAACCATTTGAAATCTCTCAAGAAACTCAAGCTGACAGGCTGCTATGCTCTCGAGAAATTTTTGTTATCATCAGAAGAAATGAGAAGCTTACGTTTGAATGCTACCAGGATAAAAACATTGAACTTGCCTGTTGGACGATTCAATAAACTTGAAGAGCTATATCTCGGTGGGCATCTCAAGAGCTTTCAAGTAAATGAGCTAAGTTGCTTAACATCTCTTAAAATATTCTCTCTTGATTGTCTTAGAGGAAGAATAGACAAATCAAAATTAGTCATTCTGTTTGATGCCTGGTGTTCATTAGAAGAATTGAGGTTGAGATACTGTGAGGTTTCTGAGATCCCTGACAATATCAGTGCCATGTCATTGTTGAAGATTCTATCACTACAAGGAAGCAGCGTTAAGAGTTTGCCAGATAACATCAAGCATCTTTCAGAGCTCAAAGTAATTGATTTGGGTGAATGCAAGAGACTTAGGTCCTTACCAGAACTTCCACCTTCCCTTACTTATTGTTATCTCAACAGATGCCAATTATTGGAGACCTTCGTTTTCCCACTAATGCGAGCAATACATAACTCTAGCGAGGTTAGATTTTGTTATCCCGGACGCACAATCCCAAGGGGCTTCAAATATTCTCAGACCGCTAAGAGGTCCATTAGTATTGAGCTTGCACCAGCTTCTTCTGACCATTTATTGGGTTTCGCTACTTGTTGTATTCTTTCCACATCGCCAATCAACTCTTTGACACGAGTTGAGAGAAAATTTGACTTTGAAGATGAAAAGATCTATTACAGGGGTGACGACAAAATTAGTTACCTCGAGTATGGGAGTACAGATCATGTTTTGTTATGGTATGATCCAGTGGATCGCATGTTGAAGGAAAACCAAAGAAGGCGATTTGATGAGCGCGCCGCTTACAAGTTTGCATGTGAATTCTTCTTCGTACATTACTTAGGTTGTCATGTGGATGAAATTAATGACAGGATAAAAGGGTGTGGAATTTGGCCAATATATGCATCAGAATTACAGGGGAAAATGGAATTAAGGCTGGAGACGAATGCTATTACAGGCAGTACCAGCCAGCACCCTAATGCTAAAGCAGGCCAACATCAGCCAGCACATGATTCCGTTAGGAGAAGCACTCGTGTGCGCCAGAGGACAGGGAACTTGACCTCGATGCCGTACTTTCTGAGAACCAAGAGAGGCCGAAATGAGCGCACGGCCCCAAAGGATAACAAAAGAATTGCTTGA 3234 0.3813 MSTFTTSSKVPQEKYDVFVSFRGSDIRRGFLSHLKKQLRLKGIDVYEDERLERGNKISSALLKAIERSRIALVIFSKDYASSRWCLEELEKIMECKRANNQIVIPVFYNVDPSHVRHQEGSYADSFSQHQQKFKDNLLQVWRSVLKETANLSGYYHSSDFQNEYDLIEGIIKDVLKKVEHKDTMEPKILIGIEENLPTIESFMKDDSQEVRLLGIWGKGGIGKTTLARAAFDKFSHQFDSSYFAANVREESKKIGLTCLLEKILIVLLNEENLTMVGMPDIQRRLHRTRVLLVLDDVDTPSQLQYLIEENLSLEPSSKVIITSRDKHVLVSGGVHEVHQVKELNNEESLQLFCRQAFKQGHPKQGYEKLSVQVIEYAKGLPLALKVLGSYLNSRNTKAWESALKKLRKYPNREIQTVLRVSYDGLDIPEKELFLNIAFFFRGEKKEDIMRVLDACNDDLYVDIGIDRLLDKALITISSGSRVEIHDMLQEMAEEIVREKSREHPESRSRLNDAKEIQDILENNKGTYAIKGITLIQNDKSTQLPFGLESLPNKLRFFCWDHYPLKTLPLDFCTKKLVEIQMEGSQIVKLWDGVQDLMNLKKINLGSSQLKELPDFSMAQNLEIMDLRYCGCLCSIHPSILSLPKLVSLNLEECHKLTNLHGDNHLKSLKKLKLTGCYALEKFLLSSEEMRSLRLNATRIKTLNLPVGRFNKLEELYLGGHLKSFQVNELSCLTSLKIFSLDCLRGRIDKSKLVILFDAWCSLEELRLRYCEVSEIPDNISAMSLLKILSLQGSSVKSLPDNIKHLSELKVIDLGECKRLRSLPELPPSLTYCYLNRCQLLETFVFPLMRAIHNSSEVRFCYPGRTIPRGFKYSQTAKRSISIELAPASSDHLLGFATCCILSTSPINSLTRVERKFDFEDEKIYYRGDDKISYLEYGSTDHVLLWYDPVDRMLKENQRRRFDERAAYKFACEFFFVHYLGCHVDEINDRIKGCGIWPIYASELQGKMELRLETNAITGSTSQHPNAKAGQHQPAHDSVRRSTRVRQRTGNLTSMPYFLRTKRGRNERTAPKDNKRIA 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4027g00011 1077 Gene3D - 12 180 IPR035897 -
Pral4027g00011 1077 MobiDBLite consensus disorder prediction 1060 1077 - -
Pral4027g00011 1077 SUPERFAMILY L domain-like 484 846 - -
Pral4027g00011 1077 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral4027g00011 1077 PRINTS Disease resistance protein signature 284 298 - -
Pral4027g00011 1077 PRINTS Disease resistance protein signature 377 391 - -
Pral4027g00011 1077 PRINTS Disease resistance protein signature 803 819 - -
Pral4027g00011 1077 PRINTS Disease resistance protein signature 212 227 - -
Pral4027g00011 1077 Gene3D - 181 334 IPR027417 -
Pral4027g00011 1077 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 684 IPR044974 GO:0006952
Pral4027g00011 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 435 IPR027417 -
Pral4027g00011 1077 FunFam Disease resistance protein (TIR-NBS-LRR class) 344 426 - -
Pral4027g00011 1077 Gene3D Ribonuclease Inhibitor 682 856 IPR032675 -
Pral4027g00011 1077 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 180 - -
Pral4027g00011 1077 Pfam Leucine Rich Repeat 575 594 IPR011713 -
Pral4027g00011 1077 ProSiteProfiles TIR domain profile. 13 178 IPR000157 GO:0007165
Pral4027g00011 1077 Pfam NB-ARC domain 200 415 IPR002182 GO:0043531
Pral4027g00011 1077 SMART till_3 14 151 IPR000157 GO:0007165
Pral4027g00011 1077 Gene3D - 342 426 IPR042197 -
Pral4027g00011 1077 Gene3D Ribonuclease Inhibitor 484 681 IPR032675 -
Pral4027g00011 1077 MobiDBLite consensus disorder prediction 1018 1053 - -
Pral4027g00011 1077 MobiDBLite consensus disorder prediction 1058 1077 - -
Pral4027g00011 1077 Pfam C-JID domain 861 1003 IPR045344 -
Pral4027g00011 1077 Pfam TIR domain 14 184 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4027g00011 Pral-Chr4027 76201 79867 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4027g00011 15 808 WRKY Transcription Factor Family AT4G12020 29.524 3.48e-85 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4027g00011 - - pcin:129311144 1097.42