Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4027g00001 ATAATCTCTTTACCAAATGGGTTTTCAGGAAGATGGTTGAAATCCCTCATTTCTCATAAAAAGCCCTCCTCCAATGACCCTGAGAAGGTTGGGGATAAGAGTAAGAAGAAGTGGAGGCTGTGGAGAAGCTCTTCAGAAGGTTTTGGATTTGGGTCCTCCACGAAAAGCATCAAGAAGGAACGCGAAGCTGCTTCAGAGAAGTCTGATTCATCTACGTTTGCGGTGGATGATACGCTTGCTTCTGCCATGGCTACTGTGGCAGTCCGAGCTGCTCCTAAAGATTTCATGCTAATCAAGCAGGAATGGTCTGCCATTCGGATTCAATCTGTGTTTCGAGGTTTCTTAGCTAGACGAGCTTTGAGGGCATTGAAGGCAGTGGTGAGGCTGCAAGCAATATTCAGAGGAAGGCGAGTGAGAAAGCAAGCAGCTATAACACTAAGGTGCATGCATGCTCTGGTTAAAGTTCAGGCACGTGTGAGGGCAATGAATGTAAGGATGTCTCCAGAAGGGAAGGCTGTTCAGAAATTATTAGATGATTACCGCAGACAAGCTGAAGATCCTGTTAAGCAGGCTGAGGAAGGATGGTGTGACATTCCAGGAACTGTCGATGAAGTTAAAGCAAAGATACAAATGAAGCAAGAGGCGGTCATCAAAAGGGAGAGAGAAATGGCTTATTCTCTTTCTGCTCAGGCACGAGTGGGTGGGAGTCCAAAAGCAAGAGGCACAAAGACAGTGAACAAGAGCTTGTTAGAGCAATGGATGACAGTGAAGCCATGGGAAGCAGGTTGA 789 0.4639 IISLPNGFSGRWLKSLISHKKPSSNDPEKVGDKSKKKWRLWRSSSEGFGFGSSTKSIKKEREAASEKSDSSTFAVDDTLASAMATVAVRAAPKDFMLIKQEWSAIRIQSVFRGFLARRALRALKAVVRLQAIFRGRRVRKQAAITLRCMHALVKVQARVRAMNVRMSPEGKAVQKLLDDYRRQAEDPVKQAEEGWCDIPGTVDEVKAKIQMKQEAVIKREREMAYSLSAQARVGGSPKARGTKTVNKSLLEQWMTVKPWEAG 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4027g00001 262 Gene3D - 98 147 - -
Pral4027g00001 262 ProSiteProfiles IQ motif profile. 100 128 IPR000048 GO:0005515
Pral4027g00001 262 Pfam IQ calmodulin-binding motif 124 141 IPR000048 GO:0005515
Pral4027g00001 262 Pfam IQ calmodulin-binding motif 102 121 IPR000048 GO:0005515
Pral4027g00001 262 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Pral4027g00001 262 PANTHER IQ-DOMAIN 5-RELATED 10 258 - -
Pral4027g00001 262 SMART iq_5 122 143 IPR000048 GO:0005515
Pral4027g00001 262 SMART iq_5 99 121 IPR000048 GO:0005515
Pral4027g00001 262 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 91 143 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4027g00001 Pral-Chr4027 1193 2777 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4027g00001 7 261 IQD Protein Family AT1G72670 51.103 1.40e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4027g00001 - - ahf:112710157 296.204