Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00046 ATGGGTGCTTTCGGAAGATGGTTGAAATCCCTCATTTCTCATAAAAAGCCCTCCTCCAATGACCCTCATCAGAAGAAGCGCGAAGCTGCTTCAGAGAAGTCTGATTCATCTACGTTTGCGGTGGATGATACGCTTGCTTCTGCCATGGCTACTGTGGCAGTCCGAGCTGCTCCTAAAGATTTCATGCTAATCAAGCAGGAATGGTCTGCCATTCGGATTCAATCTGTGTTTCGAGGTTTCTTAGCTAGACGAGCTTTGAGGGCATTGAAGGCAGTGGTGAGGCTGCAAGCAATATTCAGAGGAAGGCGAGTGAGAAAGCAAGCAGCTATAACACTAAGGTGCATGCATGCTCTGGTTAAAGTTCAGGCACGTGTGAGGGCAATGAATGTAAGGATGTCTCCAGAAGGGAAGGCTGTTCAGAAATTATTAGATGATTACCGCAGGCAAGCTGAAGATCCTGTTAAGCAGGCTGAGGAAGGATGGTGTGACATTCCAGGAACTGTCGATGAAGTTAAAGCAAAGATACAAATGAAGCAAGAGGCGGTCATCAAAAGGGAGAGAGCAATGGCTTATTCTCTTTCTGCTCAGGCACGAGTGGGTGGAAGTCCAAAAGCAAGAGGCACAAAGACAGTGAACAAGAGCTTGTTAGAGCAATGGATGACAGTGAAGCCATGGGAAAGCAGGTTGATGGACGGTGGTAACTATTATGACTCAACTGACATTATCACTCCATTGTCCAGGAAAAGCAATGATCTTGTTCAAGAACAAGGGTTGATCAAAGCAAGAAGGAATGGTGTGACCGAAATTATTTCCAGTAGGTCTCTTACAACAAGCCAATCGACTCTGACATCATCATCATCATCTTCAACCTCGAGTTCTGAAAGCTGCACTTTTGATGATAGCCCTGAATCATCAACTTCATACACATCCATATCACATTGTGTACCATTTAGCAGCAATACTCTTGCGGAGGAAACGAGGGAGGAAAAGACTTTTCATAGACCTAGCTATATGAATCTGACAGAGTCAACTAGGGCCAAACAAAGAGCTTGTCGTTACTTGAATATGAGTGGAGATTGTAGGAGCATTTGTTCTGGTTCTGATCCTTGTGTTAATTTGTGGAAAGGTGTTTGTGCAACACCTGAAAGGTTTTCTTACCAACAGAGAAACTTTGCGAGACAACAAAGGTTGGCTTAG 1197 0.4444 MGAFGRWLKSLISHKKPSSNDPHQKKREAASEKSDSSTFAVDDTLASAMATVAVRAAPKDFMLIKQEWSAIRIQSVFRGFLARRALRALKAVVRLQAIFRGRRVRKQAAITLRCMHALVKVQARVRAMNVRMSPEGKAVQKLLDDYRRQAEDPVKQAEEGWCDIPGTVDEVKAKIQMKQEAVIKRERAMAYSLSAQARVGGSPKARGTKTVNKSLLEQWMTVKPWESRLMDGGNYYDSTDIITPLSRKSNDLVQEQGLIKARRNGVTEIISSRSLTTSQSTLTSSSSSSTSSSESCTFDDSPESSTSYTSISHCVPFSSNTLAEETREEKTFHRPSYMNLTESTRAKQRACRYLNMSGDCRSICSGSDPCVNLWKGVCATPERFSYQQRNFARQQRLA 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00046 398 MobiDBLite consensus disorder prediction 16 33 - -
Pral4025g00046 398 ProSiteProfiles IQ motif profile. 90 117 IPR000048 GO:0005515
Pral4025g00046 398 Gene3D - 64 113 - -
Pral4025g00046 398 SMART iq_5 88 109 IPR000048 GO:0005515
Pral4025g00046 398 SMART iq_5 65 87 IPR000048 GO:0005515
Pral4025g00046 398 MobiDBLite consensus disorder prediction 273 299 - -
Pral4025g00046 398 Pfam IQ calmodulin-binding motif 68 87 IPR000048 GO:0005515
Pral4025g00046 398 Pfam IQ calmodulin-binding motif 90 107 IPR000048 GO:0005515
Pral4025g00046 398 ProSiteProfiles IQ motif profile. 66 94 IPR000048 GO:0005515
Pral4025g00046 398 MobiDBLite consensus disorder prediction 14 35 - -
Pral4025g00046 398 PANTHER IQ-DOMAIN 5-RELATED 1 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00046 Pral-Chr4025 566099 568339 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00046 1 374 IQD Protein Family AT1G72670 39.627 1.81e-81 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00046 - - ahf:112710157 332.413