Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00042 ATGGCTAAGGTTGTGTTTGCCAAGCTCCGCTCTCAATTTGATAGGTGCTACTTCTTGAAAAATTTCACGGAAAAGTATGAAAAGCATGGATCGGAACATGTACGTGACAAACTCTTTCAAGAACTATCAAAGGATAAATCTCTTGAATGGCTCAGTTGTAGAAAGGTTTTGATTGTACTTGATGATGTTAGCAACACAAAACAGTTAGATGAGTTGACAAGTGAAGCTCCTCGTTTGGGAACTGGTAGTAAAGTCATCATAACAAGTAGAGATAAGCATGTGCTCAATGGAAGAGTTGAGAAAATACATGAGGCCGAGGCATTGAGCTACAACAATTCACTTGAGCTCTTCAGCCTCAAAGCCTTCCACAAAGATGGTTATGAAAGTGAATATGAACAACTAGTTAAAAGAGCACTTGCTTATGCCAAAGGCATCCCACTGGCCTTAACCGTTTTGGGTTCATTCCTTTATTCCAGAACTGTAGAAGAATGGGAAAGCGCATTGAGGAAATTAGAAAGGACACCCCATCCAGATATTCAAGCTGTGTTAAAATTAAGCTACGATGGACTTGATGATGAAGAGGAGGAGATATTTTTAGACATTGCTTGCTTTTTTAAAGGTAAACCTAGACAATATGTAGAAGCAATGCTAAAGAGCTTTGGCTTTCACACAAGCATTGGTTTGGGAATTCTTGTGGATAGGGCGTTGATAAGTCTTAGTCATGATGTGGTATGGATGCATGATTTAATTCAATCAATGGCTTTTGAAATTGTTCGCAAAGAGTGTAAGAATCCTGGAGGGCGTAGTCGACTATGGAATTCCGATGAGATCGTCGACGTTCTAAAACATAATCTAGGAAGTGATGCAATTCAAGGCATAAGTTTAGATTTGTCTCAAATTGAAGAATTACAATTGAGTGCTGATTCCTTTGGAAAGATAACAAATTTAAGGCTTTTGAAACTCTATTCATTTGACCCTAGAAGATCGTGTGTTGTGAATCTTCCTTCAGGGCTTGAATCATTTCCCAATTTGTTACGGGCTCTTGAGTGGGGCAATTTTCCTTTAAAGTCTTTACCATTGTCATTCTGTGCTGAGAAGCTAGTTGAACTTCGCATGCCCCGTAGCCGCCTTCAAAAACTATGGGATGGCAAGCAGGACTTGGTGAATTTAAGGAATATAAACCTTCAGAAATCCAAAAAATTGATAGAGTTGCCAGATTTGTCAACAGCTAAAACACTTGAATGGGTTTGTCTTAAATGCTGTAAAAGTTTATGTTATCTTCATCCATCCATTTTGTCTCTGCCGAGATTGAAGGATGTGGATCTTCGGCTTTGCAAAAACCTAAAGAGTTTGAAAACAGAGAGTCAATCAAAATCGCTCTTGCGACTAAATGTGGCTAATTGCTATGGTCTCAAGGAATTTTCATTCTCTTCGGACAAACTTACTTATTTAGATTTATGGACCTCAACAGTCGAGAATATAGACTTTTCAATGGGGCATATGGACAACCTTCGGCGTCTCTCTCTTAATGGTTTGAAATTAAAGAATCTTCCAATTAACGACATTTGTTGCATGAGATCTCTTGACGACCTTTGTCTTGAAAGTTGCACGGGAATGATTGACAAATCAAAGCTCCATAGCTTATTTGATGCTTTGCGATATCTGGTATCACTTTCTTTGGAAGAGTCATTCACATTAACGGAACTTCCAGACAATATCAAGCATCTCTCGAGGCTACAATATCTTGATGTAAGCCGTTGCAGATACCTTCAATCTTTACCGGAGCTTCCTCCATCCATTGCAAAATTATATGCCTACGGCTGCACATCATTAAAGACGCTACAATTCCTTCAATCTCCATTGTTGGCAGATGAAATAACGTTGGGTTCAGCACTCCGTTCCTCAGCTAGTTATCTCCAAAATCTTCGACATCTTTTTCTTGGTGGTTGTAAACAGTTGTGTGAACTCCCTGAAAGCATCGGCTCCTTATCTTCATTGTCTTCACTGGATTTGAGTGGAAGTATTGTAGCGAGCTTGCCTGCTAGTATCAAGTATCTCTCAAATCTAAAAGAAATACGCTTGACCAATTGTACAAGACTTCGTTCTCTGCCAGAACTGCCGCCATCCACAGAAACCGTCCTCGCCGGTGGTTGCATATCATTGGAGATTGTACCCATTTCAATACCTTTTGCACCACAATTGAAGTCGCTACTTCTGAGAGGTTGCTTGAAATTGGAGAACTGCTCTCTGTCTCATGTGACGGAAAGTACTTATTTCTTAATGAAGCGATTGGTGTACACAAACCAAGGCGGTGCTGTCTGTTACCCTGGAATAAAAGTTCCAAAGTGGTTTGGATCTAATGAGAGAACAGAGGCTTCCAACTGTATAACTATTGAGTCTCCTTCAGCCACAAACGACCTAATCGGCTTCATCTTTTGCTGTATTCTTTCTCGGCATTCCTATGACGATGACGTGCATTGCCAAATTGATTATGATGGTAAGCGGTTCGCATACTCAAAGTTTGGTTCTTATGCGAAAAAATTTTGTGATGATGAAAATTCGGAATCACGTCATGTTTTTTTGTGGTGTCATCCTGACCGATTCATATACTTCCGCAAAGCAACGGACAACCAAAGCACCAATTACAGGCCAAAGGTGTCATTTGAATTCTCTGTCGCCAAATTTGGAGGGAAGCTCGTTGATTGTGTGATTGAAGCATGTGGAGTCTGCCCAATATATGCCTCGAAATATCACGACTTCATTCAACAAATGGGACGGGAGCCAAACTTGGGTACCCAAAAAGAGTCCTGTCATTATGATGATGAGAATTCATTTCATGAAATGCTCCAATATGTTAGATTCTCATTAAAGCAAGGGGAATGTGGCAATTTTGAAGGAAGTACTATTCCAGAGTGGTTTACGTACAAAAGGTCAATGGCAGAATATGGAAAATTGTCTAAAGGGATCAATGTCGCTCAACATGTAGATGCTATTGTTCGGAAGGGGGAGTAA 3012 0.4007 MAKVVFAKLRSQFDRCYFLKNFTEKYEKHGSEHVRDKLFQELSKDKSLEWLSCRKVLIVLDDVSNTKQLDELTSEAPRLGTGSKVIITSRDKHVLNGRVEKIHEAEALSYNNSLELFSLKAFHKDGYESEYEQLVKRALAYAKGIPLALTVLGSFLYSRTVEEWESALRKLERTPHPDIQAVLKLSYDGLDDEEEEIFLDIACFFKGKPRQYVEAMLKSFGFHTSIGLGILVDRALISLSHDVVWMHDLIQSMAFEIVRKECKNPGGRSRLWNSDEIVDVLKHNLGSDAIQGISLDLSQIEELQLSADSFGKITNLRLLKLYSFDPRRSCVVNLPSGLESFPNLLRALEWGNFPLKSLPLSFCAEKLVELRMPRSRLQKLWDGKQDLVNLRNINLQKSKKLIELPDLSTAKTLEWVCLKCCKSLCYLHPSILSLPRLKDVDLRLCKNLKSLKTESQSKSLLRLNVANCYGLKEFSFSSDKLTYLDLWTSTVENIDFSMGHMDNLRRLSLNGLKLKNLPINDICCMRSLDDLCLESCTGMIDKSKLHSLFDALRYLVSLSLEESFTLTELPDNIKHLSRLQYLDVSRCRYLQSLPELPPSIAKLYAYGCTSLKTLQFLQSPLLADEITLGSALRSSASYLQNLRHLFLGGCKQLCELPESIGSLSSLSSLDLSGSIVASLPASIKYLSNLKEIRLTNCTRLRSLPELPPSTETVLAGGCISLEIVPISIPFAPQLKSLLLRGCLKLENCSLSHVTESTYFLMKRLVYTNQGGAVCYPGIKVPKWFGSNERTEASNCITIESPSATNDLIGFIFCCILSRHSYDDDVHCQIDYDGKRFAYSKFGSYAKKFCDDENSESRHVFLWCHPDRFIYFRKATDNQSTNYRPKVSFEFSVAKFGGKLVDCVIEACGVCPIYASKYHDFIQQMGREPNLGTQKESCHYDDENSFHEMLQYVRFSLKQGECGNFEGSTIPEWFTYKRSMAEYGKLSKGINVAQHVDAIVRKGE 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00042 1003 Gene3D Ribonuclease Inhibitor 477 770 IPR032675 -
Pral4025g00042 1003 Gene3D - 1 103 IPR027417 -
Pral4025g00042 1003 Gene3D - 107 191 IPR042197 -
Pral4025g00042 1003 Pfam Leucine Rich Repeat 366 385 IPR011713 -
Pral4025g00042 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 201 IPR027417 -
Pral4025g00042 1003 PRINTS Disease resistance protein signature 50 64 - -
Pral4025g00042 1003 PRINTS Disease resistance protein signature 574 590 - -
Pral4025g00042 1003 PRINTS Disease resistance protein signature 142 156 - -
Pral4025g00042 1003 Pfam NB-ARC domain 39 181 IPR002182 GO:0043531
Pral4025g00042 1003 SUPERFAMILY L domain-like 245 622 - -
Pral4025g00042 1003 SUPERFAMILY L domain-like 545 756 - -
Pral4025g00042 1003 Gene3D Ribonuclease Inhibitor 281 474 IPR032675 -
Pral4025g00042 1003 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 473 IPR044974 GO:0006952
Pral4025g00042 1003 Pfam C-JID domain 776 916 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00042 Pral-Chr4025 542078 545384 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00042 575 724 WRKY Transcription Factor Family AT5G45050 32.184 9.76e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00042 - - pcin:129289344 799.275