Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00034 ATGTTTGACATAGCTTCCCCATCATCACCTTCTTCCATGAAATATGATGTGTTTCTGAATTTCAGAGGAGAGGACACCCGCAATTCCTTCATCAGCCATCTCTATACTGCCTTGTGCTGCAGAGATATTGAGACATACATTGATTATAAGCTCCCAAAAGGTGATGACATCTCCCAATCACTCATTGAAGCAATTCAGAATTCATCCATCTCTGTGGTGGTCATCTCTAAAGACTATGCCTCCTCCAAATGGTGTTTGAATGAGCTCCTTGAGATCCTTCGCTGCAAACGACAGCAGGCACAGATTGTTGTTCCTATCTTCTACGAAATCAACCCATCTGATGTACGCAAACAAAGGGGAGCTTATGAGAAAGCATTCGCAGAACATTTGGAGAAAAACTTAGAGAAGGTGGAGGAGTGGAGACAAGCACTTTTTGATATTGCAAATCTAGCAGGATGGGACTCCCGCAACTACAGGGATGACGAAGAACTCATTCAAAATATTGTCACGAACATTCAAAATATTGTCAGAGACATCAACAAAAAACTGAACCGTGGGTCCCCAACAACTATTGTCGGAATTGATGAGAATTTGAATCATATTGAGTCATTGCTAGAAAAATTCTCAACAATAGGGATATGGGGGATGGGCGGAATAGGCAAAACAACAATGGCTGAGGCTGTATTTGTCAAGCTCCGCTCTCAATTTGATAGTTGCTGCTTCTTGAGAAATTTTACGGAAAACTATGAAAAGCATGGGTTAGTATATGTACGTGATGAACTTTTCCGAGAACTATTAAAGAATACATCTCTTGGAAGGCTCAATCGTAAAAAAGTTTTGATTGTACTTGATGATGTTAGCAACACAAAGCAGTTTGATGAGTTGAAAAGTAAAACTCCTCCTTTGGGACATGGTAGTAAAGTCATCATAACAAGTAGAGATAAGCATGTACTTAAAGGAATTAGAGTTGATGACATACATGAGGCCAAGGCATTGAGTGACAAAAGTTCACTTGAACTTTTCAACCTCAATGCATTTCCCGAAGATAGTTATAAGAGTGAATATGAAGAACTAGTTAAAAGAGCACTTGCTTATGCCAAAGGCATCCCGTTGGCCTTAACCGTTTTGGGTTCGCTTCTACAGTTCAGACCTGTAGATCAATGGGAAAGTGCGTTGGGAAAATTAGAAAGGATGGCCAATGAAGATATTCAAGAAGTGTTAAAATTGAGCTACAATAGACTTGATGACGAAGTGAAGGAGATATTTTTAGACATTGCTTGTTTTTTTAAAGGGAGATCTGGACAATATGTAGAAGCAATGCTAAAGAGCTTTGGCTTTGGCGCAAGCATTGGTTTGGGAATTCTTGTGGAAAGGGCGTTGATAAGTCTTAGTCATGGTGCGGGAAGTGATGCAATTCAAGGCATAAGTTTAGATTTGTCTCGAATCGAAAAATTACAATTGAGTGCTGACCCCTTTAGAAAGATGACAAATTTAAGGTTTCTGGAACTCTATTCCCTCAATCATGAAAGATCGTGTATTCTGAATCTTCCATCAGGGCTTGAATCATTTCCCAATTCGTTAAGGCATCTTCGGTGGGACAATTTTCCTTTAGTGTCTTTCCCATTGTCATTTTGTGCCGAGAAGCTAGTTGAACTTCACATGCCCCGTAGCTACCTTCGAAAACTATGGGATGGCAAGCAGGACTTGGTGAATTTAAGGAATATCAACCTTCGGGAATCTATAAAATTGATAGAGTTGCCAGATTTGTCAGCCGCTGAAAGACTCGAATGGGTTGATCTTTTCGCATGTGAAAGTTTATGCCATCTTCATCCATCCATTTTATCTCTTCCGAGATTAGAGTTTGTGGATCTTGGGATGTGCAAAAACCTAAAGAGTTTGGTTACAGAGAGTCAATCAAAATCGCTCTCAAAACTAAATCCATTTTCCAAGTGTCTACCATTGTCATTTTGTGCAGAGAAACTAGTCAAACTTCTCATGCAAGGTAGCAACCTTGACAAACCATGGGATGGCATGCAGAACTTTGTGAACCTAAGGGAGATAAACCTCTATGGGTGCAACCAATTGATAGAGTTGCCAGATTTGTCAACGGCCCAAAATCTTGAACAGGTTGATCTGACACGTTGTGAAAGTTTACGACATCTTCATCCATCAATTTTATCTCTCCCAAGATTGATAGATCTGACGCTTAGGGGCTGCCGAAACCTAAAAAGTTTGAAATGTGAGAGTCAATCAAAATCTCTCTTATACCTAGATGTCGATGGTTGCTCTAGTCTCAAGGAACTTTCATTCTCTTCAGACAAAATGGAGGATTTAGATTTATACGGAACATGTGTCGAGATATTGGACTTTTCAATTGGGCCTATGGAGAAACTCGAGACGCTCTATGTCCACGGCTCAACATTAAAGAATCTTCCAATCAATGACATCTGTTACATGAGATCTCTCCAGGTGCTTCGTCTTTATGATTGTGGGGGAGGAATAATTGATAAGTCAAAGCTCCATGTCTTATTTGATGCTTTGTTATCTCTACAAACAATTGATTTGAGCGGGACCTGCAATTTGACTGAACTTCCAAACAATATCAAGCATCTCCCAAGGCTATACCATCTTAATGTAAGCGCTTCATTGTCGACGGATGAAATAACGCCGGGTTCAACATTCTGTTCCTCGGTTAGCTGTCCCAAAAATCTTAGAATTCTTATTCTTAATGATTGTGAACAATTGCATGAACTCCCGGCTGGCATCAAGCATCTTTCAAATCTAGAAGAAATTAACTTGAGCAATTGTAGAAGACTTCGTTCTCTGCCAGGTGAAATAACGCCGGGTTCAACATTCTGTTCCTCGGTTAGCTATCTCAAAAATCTTGAACGACTTATTCTTAATGGTTGTGAACAATTGTATGAACTCCCTGCTGGCATCAAGCATCTTTCAAATCTACAAGAAATTGACTTGAGCAATTGTAGAAGACTTCGTTCTCTGCCAGAGCTACCACCGTTCCTTGAAAAAATTTATGGCAAAGGTTGCATATCAGTGGAAACGTATGCTATGGAAAGTGCTTATTCCTCATTGAGCCGACTAGTGTACGCACGAAAAAGAGGTTACATTTGCTACTCCGGAAGAAAAGCTCCACAGTGGTTTACATTGAATCGGGTAGCAGAGGCCTCCAAAAATATAACTATTGAGCTTCCTTTCCCCACCAGCGACCTAATTGGCTTCATTTTGTGGTCTGTTCTTCAACGCACTTCCACCAACTTTTTATGCGAACTGTATGTTGGTGATGATTTGGGGCCATGGATCTCAAGTAGCTTTAGCGGAAAAATGACAAATTTAGATTCACATCAAGTTCTTCTGTGGAATCTACCTTGCACATTCATCGGCTTCCATAACAAGATGGACGATAAAAACACCAATTATAGATCAAAGGTGCTATTTAAATTCCGTCTTGATGCAGATAGTGGGGATGCTGATGATATGATTGAAGAATATGGAGTCTTGCCAATATATGCCTCGAAATATCGCAACTTCATTCAAGAAATGGAATTGTTGCAGTCAAACTTGGGTACCCAAAAAGAGACTTGTGCTGATGAGAATTCATTTCATGGAATCCCAAAATATGCTACTTTCTCCTTGAATCAAGGAGAAGGTGGCAATTTTGAAGGAAGTATTATTCCAGAATGGTTTACTTATAAAAGTTCAATGATAAAGTATGAATTTTCAGAAGTCTCGATCAGTGTTCGGTTTGCTCTGGATTTTGACAACTTAAAGGGTTTCATTTTCTGCTTTGTTATACCCCAGTTCTCCTCAAAAGAAAGGCACGAATGTCACTCGTCATGTTCTTTCTCTTTACATGACCTGAGTGTATCGTCTGATAGGAGTTGGATGTATGGTAACTATTTGAATGGTCCATTAGGATGGCACTATTCAATGGTAAAATTGAATTCAGATAATGTTTTTCTATGGTACGATCCCCTCTACAGTGAACTTATACTACAGAAACTCCAAAAAAAGGGGAAAGGTCATGATGAGGAGCTTGAATTTAAATTTCATTTTGGCAATTATTATACCAATGATTGCAATTCTAAAGAGCGCAACTGCTGGATCAAAGAATGTGGAGTTCGCCCAATATATGCCTCAGAGTACACGAACTTCTTTCTTCAACAACAAAATCGAAAGGAGGTGTGA 4203 0.3959 MFDIASPSSPSSMKYDVFLNFRGEDTRNSFISHLYTALCCRDIETYIDYKLPKGDDISQSLIEAIQNSSISVVVISKDYASSKWCLNELLEILRCKRQQAQIVVPIFYEINPSDVRKQRGAYEKAFAEHLEKNLEKVEEWRQALFDIANLAGWDSRNYRDDEELIQNIVTNIQNIVRDINKKLNRGSPTTIVGIDENLNHIESLLEKFSTIGIWGMGGIGKTTMAEAVFVKLRSQFDSCCFLRNFTENYEKHGLVYVRDELFRELLKNTSLGRLNRKKVLIVLDDVSNTKQFDELKSKTPPLGHGSKVIITSRDKHVLKGIRVDDIHEAKALSDKSSLELFNLNAFPEDSYKSEYEELVKRALAYAKGIPLALTVLGSLLQFRPVDQWESALGKLERMANEDIQEVLKLSYNRLDDEVKEIFLDIACFFKGRSGQYVEAMLKSFGFGASIGLGILVERALISLSHGAGSDAIQGISLDLSRIEKLQLSADPFRKMTNLRFLELYSLNHERSCILNLPSGLESFPNSLRHLRWDNFPLVSFPLSFCAEKLVELHMPRSYLRKLWDGKQDLVNLRNINLRESIKLIELPDLSAAERLEWVDLFACESLCHLHPSILSLPRLEFVDLGMCKNLKSLVTESQSKSLSKLNPFSKCLPLSFCAEKLVKLLMQGSNLDKPWDGMQNFVNLREINLYGCNQLIELPDLSTAQNLEQVDLTRCESLRHLHPSILSLPRLIDLTLRGCRNLKSLKCESQSKSLLYLDVDGCSSLKELSFSSDKMEDLDLYGTCVEILDFSIGPMEKLETLYVHGSTLKNLPINDICYMRSLQVLRLYDCGGGIIDKSKLHVLFDALLSLQTIDLSGTCNLTELPNNIKHLPRLYHLNVSASLSTDEITPGSTFCSSVSCPKNLRILILNDCEQLHELPAGIKHLSNLEEINLSNCRRLRSLPGEITPGSTFCSSVSYLKNLERLILNGCEQLYELPAGIKHLSNLQEIDLSNCRRLRSLPELPPFLEKIYGKGCISVETYAMESAYSSLSRLVYARKRGYICYSGRKAPQWFTLNRVAEASKNITIELPFPTSDLIGFILWSVLQRTSTNFLCELYVGDDLGPWISSSFSGKMTNLDSHQVLLWNLPCTFIGFHNKMDDKNTNYRSKVLFKFRLDADSGDADDMIEEYGVLPIYASKYRNFIQEMELLQSNLGTQKETCADENSFHGIPKYATFSLNQGEGGNFEGSIIPEWFTYKSSMIKYEFSEVSISVRFALDFDNLKGFIFCFVIPQFSSKERHECHSSCSFSLHDLSVSSDRSWMYGNYLNGPLGWHYSMVKLNSDNVFLWYDPLYSELILQKLQKKGKGHDEELEFKFHFGNYYTNDCNSKERNCWIKECGVRPIYASEYTNFFLQQQNRKEV 1400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00034 1400 PRINTS Disease resistance protein signature 273 287 - -
Pral4025g00034 1400 PRINTS Disease resistance protein signature 981 997 - -
Pral4025g00034 1400 PRINTS Disease resistance protein signature 210 225 - -
Pral4025g00034 1400 PRINTS Disease resistance protein signature 366 380 - -
Pral4025g00034 1400 Gene3D Ribonuclease Inhibitor 470 641 IPR032675 -
Pral4025g00034 1400 Gene3D Ribonuclease Inhibitor 642 774 IPR032675 -
Pral4025g00034 1400 Gene3D Ribonuclease Inhibitor 886 1013 IPR032675 -
Pral4025g00034 1400 Gene3D Ribonuclease Inhibitor 775 885 IPR032675 -
Pral4025g00034 1400 SMART till_3 14 150 IPR000157 GO:0007165
Pral4025g00034 1400 Pfam C-JID domain 1226 1386 IPR045344 -
Pral4025g00034 1400 Pfam Leucine Rich Repeat 548 567 IPR011713 -
Pral4025g00034 1400 ProSiteProfiles TIR domain profile. 13 176 IPR000157 GO:0007165
Pral4025g00034 1400 FunFam Disease resistance protein (TIR-NBS-LRR class) 11 178 - -
Pral4025g00034 1400 Pfam NB-ARC domain 209 414 IPR002182 GO:0043531
Pral4025g00034 1400 Gene3D - 181 326 IPR027417 -
Pral4025g00034 1400 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 153 IPR035897 -
Pral4025g00034 1400 Pfam TIR domain 14 179 IPR000157 GO:0007165
Pral4025g00034 1400 SUPERFAMILY L domain-like 473 645 - -
Pral4025g00034 1400 Gene3D - 9 180 IPR035897 -
Pral4025g00034 1400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 425 IPR027417 -
Pral4025g00034 1400 Gene3D - 331 415 IPR042197 -
Pral4025g00034 1400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 649 770 IPR044974 GO:0006952
Pral4025g00034 1400 SUPERFAMILY L domain-like 646 943 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00034 Pral-Chr4025 433429 438814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00034 7 744 WRKY Transcription Factor Family AT4G12020 29.756 2.09e-77 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00034 - - pcin:129289344 946.421