Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00033 ATGACGCCTTTTAAATGCAAAAACTTCCCTTCCTGGAAGTTGCCAGGGTGCCAGCCCTTTACTTATCTCCCCAAAGGCGATGACATCTCCCAGTCACTCATTGAAGCAATTCAGGATTCATCCATCTCTGTGGTGGTCTTATCTCAAAACTATGCCACTTCAAAATGGTGTTTGAATGAGCTCCTTCAGATCCTTCGCTGCAAACAACAGCAGGCACAGATTGTTGTTCCTATCTTCTACAAAATCGACCCATCTCATGTGCACAAACAAAGGGGAGCTTATGAGCAAGCATTCGTAGAACATTTGGAGAAAAACGTAGAGAAGGTGGAGGAGTGGAGACAAGCACTTTTTGAGATTGCAAATTTAGCAGGATTGGACTCCCGCAACTGCAGGGATGACACAGAACTCATTCAAAATATTGTCAAGGGCGTCATCAACAAACTGAACCATGGGTACTCAGGAAGTATATTAGAAAATATTATTGGAATTAATGAGAATTTGGATCATATTGAGTCATTGCTAGAAGAATCCTCAACAATTGGGATTTGGGGGATGGGCGGGATAGGCAAAACAACAATGGCTAAGGTTGTGTTTGTCAAGCTCCGCTCTCAATTTGATAGTTGCTGCTTCTTAGAAAATTTTAGGGAAGAGTCAGAAAGCCATAGGTTAAAATATGTAGGTGACGAACTTTTCCGAGAACTATTAAAGGATACATCCCTTGGAGGGCTCAATCGTAGAAAAGTTTTGATTGTACTTGATGATGTTAGCAACACACAGCAGTTAGATTATTTGGAAAGTGAAGCTCCTCCTCTGGGACCTGGCAGTAAAGTCATCATGACAAGTAGAGATAAAAACGTGCTTGAGGGAAGAGTTGATAAAATACACAAGGCCGAGGCATTGGGCTATGACAACGCGCTTAAGCTTTTCAACCTCAAAGCCTTCCGCAAAGTTGGTTATAAAAGTGAATATAAAGAACTCTTTAAAAGAGCAGTTGCTTATGCTGGAGGAAATCCATTAGCCTTAACCATTTTGGGTTCATTTCTACACGCCAAAACCGCAGAGGAATGGGAAAGTGCATTGAGAAAATTAGAAAACACGATCCATCAAGATATTCAAGCTGTGTTAAAATTGAGCTATGATGGACTTGATTATGAAGAGAAAGAGATATTTTTACTCGTTGCTTTCTTTTTGAAAGGTGAATCTAGAAGATGTGTAATGACAACGCTAGAGAGCCGTGGCTTTCAAGCATGCTTTGGTTTGAGAATCCTTATGGATAAGGCGCTGATAACTATTGATTCTGGGGTATGGATGCATGATTTAATTCCATCAATGGCTTTCGAAATTGTTCGTCAAGAGTGTGTGAAAAATCCTGAAGGACGTAGTCGACTATGTAATCCTGATGAGATCTGTGAGGCGCTTGAAAATAATCAGGGAAGTGATGCGATTCAAGGCATAAGTTTAGATTTGTCTCAAGTTGGAGATCTACAGTTGAGTGCTGATGTCTTTAGAAAGATGCCTAATTTAATGTTTCTGAAATTCTATTCTGTCGAGGTTAAAAGATCTTGCAGTGTAAAACTCCCTTCAAGGCTTGAGGCATTTTCCAATTCATTAAGGTATCTTGAATGGGTCAATTTTCCCTTAGAGTCCCTACCATTGTCATTTTGTGCTGAGAAGTTACTTGAATTTCACATGCCTTACAACCACCTTAAAATATTATGGAACGGAGTAAAGAATTTTGGGAAGTTAAGGGAGATAAACCTTGCTGAATCTAAACAATTGACAGAGTTACCAGATTTCTCGGCGGCTCAAAATCTTAAACATGTTGATCTTTGTGGGTGTAAAAGTTTAGGCCATCTTCATCCATCAATTTTATCTCTCCCGAGATTGAGCAGCGTAATGCTTATTAATTGCAGAAACATAAAGAGTTTGAAATCTGAGAATCAGTCAAAATCTCTCGCAAAGCTAATTGTCGTCGGCTGCAATGGTCTCAAGGAATTTTCATTCACTTCAGACAAAATAACTTATTTAGATTTACGGCCCACAAGTGTCGAGATATTGGACTTTTCAACTGGGTGTATGGAGAAACTCCAGTACCTCGTTCTCAACTGCTCAAGACTGAAATATCTTCCAATTAATGACATTTGTTGCATGAGACGCCTTCAGAGTCTTGCTCTTTATGATATTGGAGGATTAATTGACAAATCAAAGCTCCATAGCTTATTTGATGCTTTGCTATCTCTAAAAGCAATTCATTTGGATGGAGCATTCAAATTAACTGATCTTCCAAACAATACCAAACATCTTTCGAGGCTACGATGTCTTTACGTAAGCAATTGTAAAAGCCTTCAATCTTTACCAGAGCTTCCACCATCCATCGAAAAGTTAGGTGCCTACGAATGCTCATCATTGAGGACACTACAACTTACTTCTCATTTTGAACCTTCATCGTTGGCAGATAGAAAATTGTTGGGTCCAACGCTCTGTTCCTCAGTTAGTTATCTTAGAAATCTTCAACGGCTTACTCTTAAAGGTTGTGAACAGTTGTATGAACTCTCTGAATTCATGGACTCCTTTTCTTCATTATCTTCACTGGACTTGAGTGAAAGTAATGCGGAGAGCTTGCCTGCCAGCATCAAGCATCTTTCAAATCTAGAACAAATTTTCTTGCGGAATTGTAGAACACTTCGTTCTCTGCCAGAATTGCCGCCATTCCTCGAAACTGTTGATGCTAGTGGTTGCATGTCACTGGAGATTGTACCCACTGTAATAACTTCTGCACGACAACTGAGTTTCCTACATCTGAAAGATTGCTCGAAATTGGAGAACTGTTCTTCATCCCGTGACATTGAATGGGCATATTTCTCATTGAAGCGATTAGTATACACAAAACAAAGAGGAGGTTTTGTTTACCCAGGAAGAAAAGTTCCAGAGTGGTTTATGTTTAATCAGGGAACAAAGGCTTCGAACTATGTAACTATTGAGCTTCCTTCAACCAATAACGACCTAATTGGCTTCATTTTCTGCTCTGTTCTTTCTCATTTCTGTTCTCATGACTCTCATTATAGCTTACAATGCCAACTTTATTATGATAGTAAGTGGTGCAAATGCCTACCATTTCCTATGCTCATCGAAAATTTTGATTCACGTCATGTTATTCTATGGTGTGATCCTTCCACACTCATAAAGTTGGGTAAAACAATGGATGATCAAAACACCAATTACAAGCCGAAGCTGTCATTTGAATTCTCTGTTATTACAAGGGATAACAAGTTAGTCGATGGTTTGGTTGAAGCATGTGGAGTCTGCCAAATATATGCCTCGGATTATCATACCTTCATTCAACAAATGGAATCGAAGTCAAGCTTGAGTACTCAAAACAAGACTTGTCATGATGTTGATGAGAATTCATTTCGTGGGATACTAAAATATGTGAATTTCTCGTTGGAGCAAGGAAAATATGGCAATTTTGAAGGAAGTGTCATTCCAGATTGGTTTACTCACAAAAGTTCGACGATAAAAGATGGAGGTTTACGGGTGAGCGTTCAGCTTGCTCCAGATTTGGAAAACTTAATGGGTTTCATTTTCTGCTTTGTCATGCCTCATTTCTCCTCAAAAGAAAGGGATCAATGTCAGTCGTCATGTACATACCTTATTGAAGATAGGAGTAATGATTGGACAAAAAGCTTGCCTTTGGAAGGTCCAATAGGATGGCACTATTCAATGATAAGATTGAATTCAGATAATGTTTTTCAATGGTATGATCCCCTCTTGCGTGGATGCATGCTGCGGGAACTTCAGAGAAGGAGAAAATCTTATGATGGGGAGCTTGAATTTAGATTCAGGTGTGGTGATGGTTTGGTTAATTCGAAATTTCAGATTGGTGAGTGCTTGATCAAAGAATGTGGGGTTCCCAGTATATGTCTCAGAGTACGCAAACTTCCTCCAACAAAAAAAATTGAAGAGGCAGTTCTTCAGACATCGCCGATCCACTTGCTTAAGCTGTGGAACCCCTCCTTCTCTCCTGAAATCCTTATTGAAAGAAATCAGACTCAGCTGCTTCGATCCATGTCAATGATCTGGGCAAGTTCCAAAGGGCCTTGCGCAATGATGTGGAACCCGAAGCCTGCTGAGAGACCCCGTTTAGCCAAGAAGTCAGCTGCCAAGTTTACCCTTTAG 4176 0.3985 MTPFKCKNFPSWKLPGCQPFTYLPKGDDISQSLIEAIQDSSISVVVLSQNYATSKWCLNELLQILRCKQQQAQIVVPIFYKIDPSHVHKQRGAYEQAFVEHLEKNVEKVEEWRQALFEIANLAGLDSRNCRDDTELIQNIVKGVINKLNHGYSGSILENIIGINENLDHIESLLEESSTIGIWGMGGIGKTTMAKVVFVKLRSQFDSCCFLENFREESESHRLKYVGDELFRELLKDTSLGGLNRRKVLIVLDDVSNTQQLDYLESEAPPLGPGSKVIMTSRDKNVLEGRVDKIHKAEALGYDNALKLFNLKAFRKVGYKSEYKELFKRAVAYAGGNPLALTILGSFLHAKTAEEWESALRKLENTIHQDIQAVLKLSYDGLDYEEKEIFLLVAFFLKGESRRCVMTTLESRGFQACFGLRILMDKALITIDSGVWMHDLIPSMAFEIVRQECVKNPEGRSRLCNPDEICEALENNQGSDAIQGISLDLSQVGDLQLSADVFRKMPNLMFLKFYSVEVKRSCSVKLPSRLEAFSNSLRYLEWVNFPLESLPLSFCAEKLLEFHMPYNHLKILWNGVKNFGKLREINLAESKQLTELPDFSAAQNLKHVDLCGCKSLGHLHPSILSLPRLSSVMLINCRNIKSLKSENQSKSLAKLIVVGCNGLKEFSFTSDKITYLDLRPTSVEILDFSTGCMEKLQYLVLNCSRLKYLPINDICCMRRLQSLALYDIGGLIDKSKLHSLFDALLSLKAIHLDGAFKLTDLPNNTKHLSRLRCLYVSNCKSLQSLPELPPSIEKLGAYECSSLRTLQLTSHFEPSSLADRKLLGPTLCSSVSYLRNLQRLTLKGCEQLYELSEFMDSFSSLSSLDLSESNAESLPASIKHLSNLEQIFLRNCRTLRSLPELPPFLETVDASGCMSLEIVPTVITSARQLSFLHLKDCSKLENCSSSRDIEWAYFSLKRLVYTKQRGGFVYPGRKVPEWFMFNQGTKASNYVTIELPSTNNDLIGFIFCSVLSHFCSHDSHYSLQCQLYYDSKWCKCLPFPMLIENFDSRHVILWCDPSTLIKLGKTMDDQNTNYKPKLSFEFSVITRDNKLVDGLVEACGVCQIYASDYHTFIQQMESKSSLSTQNKTCHDVDENSFRGILKYVNFSLEQGKYGNFEGSVIPDWFTHKSSTIKDGGLRVSVQLAPDLENLMGFIFCFVMPHFSSKERDQCQSSCTYLIEDRSNDWTKSLPLEGPIGWHYSMIRLNSDNVFQWYDPLLRGCMLRELQRRRKSYDGELEFRFRCGDGLVNSKFQIGECLIKECGVPSICLRVRKLPPTKKIEEAVLQTSPIHLLKLWNPSFSPEILIERNQTQLLRSMSMIWASSKGPCAMMWNPKPAERPRLAKKSAAKFTL 1391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00033 1391 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 392 IPR027417 -
Pral4025g00033 1391 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 817 IPR044974 GO:0006952
Pral4025g00033 1391 Pfam NB-ARC domain 173 378 IPR002182 GO:0043531
Pral4025g00033 1391 Pfam TIR domain 23 151 IPR000157 GO:0007165
Pral4025g00033 1391 Gene3D - 300 383 IPR042197 -
Pral4025g00033 1391 SUPERFAMILY L domain-like 485 921 - -
Pral4025g00033 1391 SMART till_3 3 122 IPR000157 GO:0007165
Pral4025g00033 1391 Gene3D Ribonuclease Inhibitor 466 670 IPR032675 -
Pral4025g00033 1391 Pfam C-JID domain 970 1108 IPR045344 -
Pral4025g00033 1391 ProSiteProfiles TIR domain profile. 1 148 IPR000157 GO:0007165
Pral4025g00033 1391 Coils Coil 353 373 - -
Pral4025g00033 1391 SUPERFAMILY "Winged helix" DNA-binding domain 370 473 IPR036390 -
Pral4025g00033 1391 Gene3D Ribonuclease Inhibitor 671 960 IPR032675 -
Pral4025g00033 1391 PRINTS Disease resistance protein signature 179 194 - -
Pral4025g00033 1391 PRINTS Disease resistance protein signature 334 348 - -
Pral4025g00033 1391 PRINTS Disease resistance protein signature 766 782 - -
Pral4025g00033 1391 PRINTS Disease resistance protein signature 242 256 - -
Pral4025g00033 1391 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 124 IPR035897 -
Pral4025g00033 1391 Gene3D - 18 153 IPR035897 -
Pral4025g00033 1391 Gene3D - 155 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00033 Pral-Chr4025 414070 421502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00033 834 941 WRKY Transcription Factor Family AT4G12020 33.333 4.16e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00033 - - pcin:129289344 1142.1