Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00032 ATGTTTGCCATAGCTTCCCCATCATCATCTTCTTCTTCCAAGAAATATGATGTGTTTCTGAGTTTCAGAGGAGAGGACACTCGCAGATCCTTCACCAGCCATCTCCATACTGCCTTGTGCCTCAGAGATATTGAGACATACATTGATTATAAGCTCCCAAAAGGCGATGACATCTCCCAGTCACTCATTGAAGCAATTCAGGATTCATCCATCTCTGTGGTGGTCTTCTCTCAAAAATATGCCACTTCAAAATGGTGTTTGAATGAGCTCCTTCATATCCTTTGCTGCAAACAACATCAGGCACAAATTGTTGTTCCTATCTTCTATGAAATCGACCCATCTCATGCACGCAATCAAAGGGGAGCTTATGAGAAAGCATTTGCAGAACATTTGGAGAAAAACCCAGAGAAGGTGAAAGAGTGGAGACAAGCACTTTTTGAGATTGCAAACCTAGCAGGATGGGACTCCCGCAACTATAGGGACGAAGCAGAACTCATTCAAAACATTGTCAATGACGTCATCAACAAACTGAACCATGGGTACTCAGGAAGTGTATTAGAAAATATCATTGGAATTGATGAGAATTTGGATCATATTGAGCAATTGCTCGAAGAATCCTCGACAATTGGGATTTGGGGGATGGGCGGGATAGGCAAGACAACAATGGCTCAGGTTGTGTTTGCCAAGCTCCGCTCTCAATTTGATAGTTGCTGCTTCTTGAAAAATTTTACAGAAAAGTACGAAAAGCATGGGTTAAAATATGTACGTGACGAACTTTTCCAAGAACTATCAAAGGATACATTTCTTGGGAGGCTCAATCGTAGAAAAGTTTTGATTGTACTTGATGATGTTAGCAAGACAAAGCAGTTAGACGAGTTGAAGAGTGAGTTGAAGAGTGAAGTTCCTCATTTGGGACCTGGTAGTAAAATCGTCATAACAAGTAGAGATAAGCATGTGCTTATTGTTGGAAGAGTTGATAAAATACATGAGGCCAAGGCATTGAGCGACAACAATTCACTTGAGCTTTTCAACCTCAAAGCCTTCCACAAAGATGGTTATGGAAGTGAATACGAACAACCAGTTAAAAGAGCACTTGCTTATGCCAAAGGCATCCCACTGGCCTTAACCGTTTTGGGTTCGTTTCTACATTCCAGACCTGCAGATCAATGGGAAGATGCTTTGAGTAAATTAGAAAGGATGGCCAATAAAGATATTCAAGATGTGTTAAAATTGAGCTATGATGGACTCGATGACGAAGTGAAGGAGATATTTTTAGACATTGCTTGTTTTTTTAAAGGTAGATCTAGACAATATGTGGAAGCAATGCTAGAGAGCTTTGGCTTTAACGCAAGAATTGGTTTGGGAATTCTTGTGGATAAGGCGTTGATAAGTCTTAGTGATGGTGTGATAAGGATGCATGATTTAATTCAATCAATGGCTTTTGAAATTGTTCGCAAAGAGTGTAAGAATCCTGGAGGACGTAGTCGACTATGGAATTCTGACGAGATCATCAACGTCCTAAAAAATGATCGAGGAAGTGATGCAATTCAAGGCATAAGTTTAGATTTGTCTAAAATTGAAGAATTACAATTGACATTGAGAGCTGATTCCTTTGGAAAGATAACAAATTTAAGGCTTTTGAAACTCTATTCATCTGACCCTAGAAGATCGTGTGTTGTGAATCTTCCTTCAGGGCTTGAATCATTTCCCAATTTGTTACGGGCTCTTGAGTGGGGCAATTTTCCTTTAAAGTCTTTACCATTGTCATTCTGTGCTGAGAAGCTAGTTGAACTTCGCATGCCCCGTAGCCGCCTTCAAAAACTATGGGATGGCAAGCAGGACTTGGTGAATTTAAGGGATATAGACCTTTGGGGATCCACAAAATTGATAGAGTTGCCGGATTTGTCAACCGCTGAAAGACTTAGACGGGTTAATCTTGGTGGTTGTGAAAGTTTATGCCGTCTTCATTCGTCCATTTTATCTCTTCCGAGATTGTGGTCAATATGTCTTAGGTATTGTAAAAACCTAGAGAGTTTGGAAGCAGGGAGCCAATCAAAATCGATCTCAGAACTAGATGTTGAAGGTTGCTGTAGTCTCAAGGAATTTTTATTCTCTTCAGACAAACTAACTTTTTTGAATTTATCCCACTCAAGAGTCGAGAACTTAGACTTTTCACTTGGGCCTATGGAGAAACTTCAAAGGCTCTTGCTTAAGGGTTTCAAACTAGAGAATCTTCCAATTAATGACATTTGTTGCATGAGATCTCTTGAGGAGCTTCATATTTGGGGTTTTGAGGGAATGATAGACAAATCAAAGCTCCATAGCTTATTTGATGCTTTGCGATCTCTGAAATCACTTTCTTTGACAGGGTCATGCACATTAACTGAACTTCCAGACAATATCAAGCATCTCTCGAGGCTGAAATGTCTTGATGTAAACGGTTGCAGATACCTTCAATCTTTACCGGAGCTTCCTCCATCCATTGAAGAATTACGTGCCTACGGCTGCACATCATTAAAGACGCTACAATTCACTTCTCATATTGAATCTCCATCGTTGGCAGATGAAATAATGGTGGGTTCAACGCTCTGTTCCTCAGTTAGTTATCTCCAAAATCTTCGAAAGCTTATTCTTGGTGGTTGTCAAAAGTTGTATGAACTCCCTGAAAGCATCGGGTCCTTATCTTCATTGTCTACACTGCTTTTGACTGGAACTAATGTAGTGAGCTTGCCTGCTAGTATCGAGTATCTCTCAAATCTAGAAGCAATATACTTGGCCAATTGTACAAAACTTCGTTCTTTGCCAGAACTGCCGCCATCCATCAAAAACGTTGAAGCCGGTGGTTGCATATCATTGGAGACTGTACCCATTTCAATACCTTTTGCACCACAATTGGAGACCCTATGTCTGGTAGATTGCTTGAAATTGGAGAACCGCTTTTTATCTCATGTTAAGGAAAGTGTTTATTTCTCATTGAAGCGATTAGTGTACAGTCAACGACAAGGTGGTGTCTGTTACCCTGGAAGAAAAGTTCCAGAGTGGTTTGGATCTTATCAGAGAACAGAGGCTCCCAACTATATAACTATTGAGTCTCCTTTAACCACAAACAACCTAATCGGCTTCGTTTTTTGCTGTATTCTTTCTGAGCATCCCCCCAAGCCTTACATGAAATGCCAAGTTTATTATGATGGTAAGCGGTGCTATGGCTCAGAGTTTATATTTTGGACAGATGAAAATGCGGGATCACATCATGTTTTCCTGTGGTGTGAACCTCACTCATTCCTAAAATTTCATAAAGCAATGGACAACCAGAATGCTAATTACAAGCCAAAGGCATCATTTGAATTCTCTGTTGCCAGATTTGAGCGGGAGCCCGTTGATTGTGTGATTGAAGCATGTGGAGTGATTGAAGCATGTGGAGTCTGCCCAATATATGCCTCGGAATATCGCGACTTCATTCAACAAATGGGACGGGAGCCAAACTTGGGGACCCAAAGAGAGTCCTGTCATTATGCTGATGAGAATTCATTTCATGAAATGCTCGAATATGTTAGATTCTCATTGAAGCAAGGAAAATGTGGCAATTTTGAAGGAACTTGCTCCAGATTTTGA 3612 0.405 MFAIASPSSSSSSKKYDVFLSFRGEDTRRSFTSHLHTALCLRDIETYIDYKLPKGDDISQSLIEAIQDSSISVVVFSQKYATSKWCLNELLHILCCKQHQAQIVVPIFYEIDPSHARNQRGAYEKAFAEHLEKNPEKVKEWRQALFEIANLAGWDSRNYRDEAELIQNIVNDVINKLNHGYSGSVLENIIGIDENLDHIEQLLEESSTIGIWGMGGIGKTTMAQVVFAKLRSQFDSCCFLKNFTEKYEKHGLKYVRDELFQELSKDTFLGRLNRRKVLIVLDDVSKTKQLDELKSELKSEVPHLGPGSKIVITSRDKHVLIVGRVDKIHEAKALSDNNSLELFNLKAFHKDGYGSEYEQPVKRALAYAKGIPLALTVLGSFLHSRPADQWEDALSKLERMANKDIQDVLKLSYDGLDDEVKEIFLDIACFFKGRSRQYVEAMLESFGFNARIGLGILVDKALISLSDGVIRMHDLIQSMAFEIVRKECKNPGGRSRLWNSDEIINVLKNDRGSDAIQGISLDLSKIEELQLTLRADSFGKITNLRLLKLYSSDPRRSCVVNLPSGLESFPNLLRALEWGNFPLKSLPLSFCAEKLVELRMPRSRLQKLWDGKQDLVNLRDIDLWGSTKLIELPDLSTAERLRRVNLGGCESLCRLHSSILSLPRLWSICLRYCKNLESLEAGSQSKSISELDVEGCCSLKEFLFSSDKLTFLNLSHSRVENLDFSLGPMEKLQRLLLKGFKLENLPINDICCMRSLEELHIWGFEGMIDKSKLHSLFDALRSLKSLSLTGSCTLTELPDNIKHLSRLKCLDVNGCRYLQSLPELPPSIEELRAYGCTSLKTLQFTSHIESPSLADEIMVGSTLCSSVSYLQNLRKLILGGCQKLYELPESIGSLSSLSTLLLTGTNVVSLPASIEYLSNLEAIYLANCTKLRSLPELPPSIKNVEAGGCISLETVPISIPFAPQLETLCLVDCLKLENRFLSHVKESVYFSLKRLVYSQRQGGVCYPGRKVPEWFGSYQRTEAPNYITIESPLTTNNLIGFVFCCILSEHPPKPYMKCQVYYDGKRCYGSEFIFWTDENAGSHHVFLWCEPHSFLKFHKAMDNQNANYKPKASFEFSVARFEREPVDCVIEACGVIEACGVCPIYASEYRDFIQQMGREPNLGTQRESCHYADENSFHEMLEYVRFSLKQGKCGNFEGTCSRF 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00032 1203 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral4025g00032 1203 Pfam C-JID domain 1006 1148 IPR045344 -
Pral4025g00032 1203 Gene3D Ribonuclease Inhibitor 515 701 IPR032675 -
Pral4025g00032 1203 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Pral4025g00032 1203 Gene3D - 9 178 IPR035897 -
Pral4025g00032 1203 Pfam NB-ARC domain 200 413 IPR002182 GO:0043531
Pral4025g00032 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 427 IPR027417 -
Pral4025g00032 1203 Gene3D - 333 417 IPR042197 -
Pral4025g00032 1203 Gene3D Ribonuclease Inhibitor 702 859 IPR032675 -
Pral4025g00032 1203 Gene3D Ribonuclease Inhibitor 860 1022 IPR032675 -
Pral4025g00032 1203 PRINTS Disease resistance protein signature 368 382 - -
Pral4025g00032 1203 PRINTS Disease resistance protein signature 208 223 - -
Pral4025g00032 1203 PRINTS Disease resistance protein signature 271 285 - -
Pral4025g00032 1203 PRINTS Disease resistance protein signature 802 818 - -
Pral4025g00032 1203 Pfam TIR domain 15 181 IPR000157 GO:0007165
Pral4025g00032 1203 SUPERFAMILY L domain-like 471 842 - -
Pral4025g00032 1203 SUPERFAMILY RNI-like 775 990 - -
Pral4025g00032 1203 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 702 IPR044974 GO:0006952
Pral4025g00032 1203 Gene3D - 179 326 IPR027417 -
Pral4025g00032 1203 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 179 - -
Pral4025g00032 1203 Pfam Leucine Rich Repeat 594 613 IPR011713 -
Pral4025g00032 1203 SMART till_3 15 151 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00032 Pral-Chr4025 386547 391082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00032 770 958 WRKY Transcription Factor Family AT4G12020 29.231 1.42e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00032 - - pcin:129289344 1094.34