Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00031 ATGGTTTCTGCTTCCTCAAGCTCTGGCTCTAGGCTGAATGCTCCAAGAAAGTATGATGTGTTTGTAAGTTTTAGAGGCGAAACCCGCAACAACTTCACCAGCCATCTTCATGCTGCCCTCAACCGAGAATTTGTTTTGTCCTTTCGTGACGATAAGCAGATAGAGAAAGGTGATGAAATCATGCCATCACTCATCCACGCAATCAAGGATTCCAGTGTATCTATCATAGTCTTCTCAAAAGACTACGCTTCCTCAAGATGGTGCCTGGATGAACTCGCCCAAATCATGCGGTGCAGAAAGGATGAGGGCCAGTTTGTTTTACCCATCTTCTACAAAGTTGACCCCTCACATATTCGAAAGCAGACTGGAGCTTATGAGAGGGCATTTGAACAACATGAGAAAGATTTCATGCATGATCCAGAAAGAGTGAACAGGTGGAAAGTAGCTCTTTCTGAAGCTGGCTCTTTAAGCGGCAGGCACTGCCAAGACTTCACGGATGAATCCAATTTAATTCAAGGAATTGTCACTGATGTCAGCACAAAACTGGAACAAATACATAATTGTCGACAAACATTAAAAGATGTGATTGGAAGGGATGAAATGATCAAACCCATTGAAGAGTTACTGGGAAAATCTCACAGAGTTGGAATTTGGGGGATGGGCGGTGTGGGTAAGACCACAATGGCAAATGTTGTATTTGCCAAATTATCTTCTCAGTATGACACTTGTTGCTTCTTAGAAAATATTAGGGAAAAAGCAGAAAAAAGTGGATTGGGAAGTGTTTGTAGCTATCTTGTCTCGGAGCTGCTAGGGCAAGATATGCCAAGTAACCCATCAAATGGTTTAAGAAATGCCTTTGTTGCCAGAAGGCTTGGTAAGAAAAAAGCTTTAGTTGTGCTTGATGATGTTGATCATTCTGACCAATTAGAGGGTTTGCAGGACAACATATGCAATTTCCTAGGAGAAGGTAGTAAAGTTATTACAACAACAAGAAATAGGAAATTGCTTCGAGAAAAAGGTTATGAAATACATGAGGCCAAGGGACTGAGTTATCAAAATTCGCGTCAACTTTTCATCTACAAGGCCTTTGGATCAGACCATCCAGGACATGGATATGAACAGCTCATAGAAGGATTTATACGTTATACCCTATACAATCCCTTGGCTTTAAAAGTTTTGGGTTCATATGTTCACTGTGAAGATAAAAGTTTATGGGATGGTTTGCTGAGAAAACTACAAGGAGGGGTGAAAGTGAAGGATTTGTAG 1266 0.4107 MVSASSSSGSRLNAPRKYDVFVSFRGETRNNFTSHLHAALNREFVLSFRDDKQIEKGDEIMPSLIHAIKDSSVSIIVFSKDYASSRWCLDELAQIMRCRKDEGQFVLPIFYKVDPSHIRKQTGAYERAFEQHEKDFMHDPERVNRWKVALSEAGSLSGRHCQDFTDESNLIQGIVTDVSTKLEQIHNCRQTLKDVIGRDEMIKPIEELLGKSHRVGIWGMGGVGKTTMANVVFAKLSSQYDTCCFLENIREKAEKSGLGSVCSYLVSELLGQDMPSNPSNGLRNAFVARRLGKKKALVVLDDVDHSDQLEGLQDNICNFLGEGSKVITTTRNRKLLREKGYEIHEAKGLSYQNSRQLFIYKAFGSDHPGHGYEQLIEGFIRYTLYNPLALKVLGSYVHCEDKSLWDGLLRKLQGGVKVKDL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00031 421 PRINTS Disease resistance protein signature 214 229 - -
Pral4025g00031 421 PRINTS Disease resistance protein signature 383 397 - -
Pral4025g00031 421 PRINTS Disease resistance protein signature 290 304 - -
Pral4025g00031 421 Gene3D - 15 180 IPR035897 -
Pral4025g00031 421 ProSiteProfiles TIR domain profile. 16 182 IPR000157 GO:0007165
Pral4025g00031 421 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 158 IPR035897 -
Pral4025g00031 421 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 413 IPR044974 GO:0006952
Pral4025g00031 421 Pfam TIR domain 17 189 IPR000157 GO:0007165
Pral4025g00031 421 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 412 IPR027417 -
Pral4025g00031 421 Pfam NB-ARC domain 213 402 IPR002182 GO:0043531
Pral4025g00031 421 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 184 - -
Pral4025g00031 421 Gene3D - 181 342 IPR027417 -
Pral4025g00031 421 SMART till_3 17 156 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00031 Pral-Chr4025 371306 372846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00031 11 395 WRKY Transcription Factor Family AT4G12020 29.082 1.79e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00031 - - pcin:129288608 400.979