Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00030 ATGTTTGCCATAGCTTCCCCATCATCATCTTCTTCGTCCAGGAAATATGAAGTGTTTCTGAGTTTCAGAGGAGAGGACACTCGCAGATCCTTCACCAGCCATCTCCATACTGCCTTGTGCGTCGGAGATATTGAGACATACATAGATTATGAGCTCCCAAAAGGTGATGACATCTCCCAATCACTCATGCAAGCAATTCAGGATTCATCCATCTCTATGGTGGTCTTCTCTGAAAACTATGCCTCCTCCAAATGGTGTTTGAATGAGCTCCTTCAGATCCTTCGCTGCAAACAACATCAGGCACAGATTGTTGTTCCTATCTTCTACGAAATCGACCCATCTCATGTGCGCAATCAGAAAGGAACTTATGAGAAAGCATTCTCAGAACATTTCAAGAAAAACCCAGAGAAGGTGGAGGAGTGGAGACAAGCACTTTTTGAGATTGCAAGTCTAGCAGGATGGGACTCCGGCAACTACAGGGATGAAGCAGAACTCATTCAAAATATTGTCATGGACATCAACAAAAAACTAAACCATGGGTCCCCAACAACTGTATTAGATAATATTGTCGGAATTGATTATGAGAATTTGGATCATATTGAGCTGTTACTAAAAGGATTCTCGATGGTTGGGATTTGGGGTATGGCCGGGATAGGCAAAACAACCATGGCTAAGGCTATGTTTACCAAACTCCACTCTCAATTTCATAGTTGCTGCTTCTTAGAAAATTTTAGGGAAGAGTCAGAAAAGCATGGGTTAAAATATGTGCATGATAAACTTTTCCATGAACTATTAAAGGATACATCTCTTAAAAGACTCAGTCATAGAAAAGTTTTGATTGTACTGGATGATGTGAGCAACACAAGGCAGTTAGATTATTTGGAAAGCGAAGCTCCTCTTTTAGGACGTGGTAGTAAAGTCATCATAACAAGTAGAGATAAGCATGTACTTGATGGAAGAGTTGAGAGAATACATGAGGCCAAGGCATTGAGCTACAACAATTCACTTAAGGTTTTCAACCTTAAAGCCTTCTGCAAAGATGGCTATAAAAGTGAATATGAAGAACTAGTTGAAAGAGCTCTTGCTTATGCCCAAGGCGTTCCATTAGCCTTAACCATTTTGGGTTCATTCCTTTATTCCAGAACTGTAAAAGAATGGGAAAGTGCATTGAGGAAATTAGAAAGGACACCCCATCGAGATATTCAAGCTGTGTTAAAATTGAGCTATGATGGGCTTGATGATGAGGACAAACAGATATTTTTAGACATTGCTTGTTTTTTCAAAGGTGAATTAAGAAGTTATGTAGAAGCAATGCTAGAGTACTGTGGCTTTGAGGCAAGCAATGGTTTGAGAACCCTTATGGATAAGGCGTTGATAAGTGTCAGTTGTGATGCAGTATGGATGCATGATTTAATTCAATCAATGGCTTTCGACATTATTCATCAAGAGTGCATCACAAATCCTGGAGGACGTAGTCGACTATGGAAGCCTGATGAGATCTATGATGTTCTAAAAAATGATCGAGGAAATGATGCAATTCAAGCCATAAGTTTAGATTTGTCTCAAATTAAAGATTTGGAATTGAGTGCTGATGTCTTTAGAAAGATGCCTAATTTAAGGTTTCTAAAATTCCATTATTCACATGGGCATGAAGGATCGTGTACTGTGAATCTTTCTTCAGGGCTTGAGTCATTGCCCAATTCATTAAGGTGTCTTCAATGGGACAATTTTCCTTCCAAGTGTCTACCATTGTCATTTTGTGCAGAGAAACTAGTCGTACTTCGCATGCAAGGTAGCCACCTTGAAAAACTATGGGATGGCATGCCGAACTTTGTGAAGTTAAGGGAGATAGACCTTGCTGGGTCCAAACAATTGATAGAGTTGCCAGATTTCTCAACAGCCCAAAATCTTAAACAGGCTGATCTGACAGATTGTGAAAGTTTACGGCATCTTCATCCATCAATTTTATCTCTCCCAAGATTGAGAGATCTGAAACTTTGTGACTGCCGAAACCTAAAAAGTTTGAAATGTGAGAGTCCATCAAAATCTCTCTTACACCTAGATGTCTGTGGTTGCTCTAGTCTCAAGGAATTTTCATTCTCTTCAGACAAAATGGAGTATTTAAGTTTAGAAGGAACATGTGTCGAGATATTGGACTTTTCAATTGGGCGTATGGAGAAACTCAAGGGGCTCTGTCTCAACGGCTCAACATTAAAGAATCTTCCGATCAATGACATCTGTTACATGAGATCTCTCGAGGAGCTTCATCTTTATGATTGTGGAGGAACAATTGACAAATCAAAGCTTCATGGCTTATTTGATGCTTTGCTATCTCTACAAACAATTGATTTGAGCGGGACATGCAAATTGACTGAACTTCCAAACAATACCAAGCATCTCTCAAGGCTACAACATCTTAACGTAAGCGGTTGCAAGGACCTTCAATCTTTACCCGAGCTTCCTCCATCCATTGAAGTATTAGATGCCGTCGAATGCACATCATTAAAGACACTACAATTCACTTCTCATATTGAATCTTCATTGTCGACAGATGAAATAACGCCGGGTTCAAACTTCAAGCATCTTTCAAATCTAGAACGAATTAAGTTGAGCAATTGTAGAAGACTTCGTTCTCTACCAGAGCTACCGCCGTTCTTTGAACATATTGATGCCCAAGGTTGCATATCATTGGAAACGCATGTTATGGAAAGTGCTTATTTCTTATTGAGGCGACTGGTATACGCACAAAAAGAAGGTTGCATTTACTACTCCGGAAGAAAAGCTCCAGGGTGGTTTAGATTTAATCAGGCAGTAGAGGCTTCCAAAAATATAACTATTGAGCTTCCTTTCCCCACCAGCGACCTAATTGGCTTCATTTTCTGCTGTGTTCTTTCTCGATACCCTCCCACCTACTTTGAATGCAAACTGTATGTTGGTGATGGTTTTCCATGGATTACGACAAGCTTTATGGGAAATATGACAAATTTAGATTCACATCAAGTTTTTCTGTGGTGTCGACCTTGCACATTCAGGGGCTTCCATAACAAGATGGACGATCAAAACACCAATTATAGACCAAAGTTGCTATTTGAATTCAGTCTTGTTGCAGAGAGTGGGGATGTTGATGGTGTGATTGAAGAATGTGGAGTCTTGCCAATATATGCCTCGGAATATCCCAACTTCATTCAACAAATGGAATTGCAGTCAAACTTGGGTACCCAAAAAGAGACTTGTCATGATGCTGATGAGAATTCATTTAATGGGATCCTAAAATATGCTAGTTTCTCCTTGAATCAAGGAAAATGTGGCAATTTTGAAGGAAGTCTTATTCCAGAATGGTTTACTTATAAAAGTTCAACAATGAATTATGACCTTTCAGAAGTGAGGATCGGTGTTCAGTTTGCTCTAGATTTTGACAACTTAATGGGTTTCATTTTCTGCTTTGTTATACCCCAGTTCTCCTCAAAAAAAAGGGATGAATGTCACTCGTCATGTTATTTCAATTTACATGACTTGAGTGTATCGTCTGATAGGAGTGAAGATAGGAGTTGGATCTATGGTAACAATTGGAAAGGTCCATTAGGATGGCACTATTCAATGGTAAAATTGAATTCAGATAATGTTTTTCTATGGTACGATCCCCTCTACAGTGAACTCATACTACAGAAACTCCGAAAAAAGGGAAAAGGTCATGATGAGGAGCTGGAATTTAAATTTCATTTTGGTGATTATTATACCAATAATTGCAATTCTGAAGAGTACAATTGCTGGATCAAAGAATGTGGAGTTCGGCCAATACATGTCTCAGAGTACAAAAACTTCCTTCTTCAACAAAAAAAATTGAAAGGAGGTATGAAAAAAAAGAGGCCTCGAAATATTGATGATGACCAGTACCAACTCCCTTTAACAAAGAAATTGAAGGAGTCTTCAATCATTCAATCTATTCCCCAGAATCCTGAGTCCAAGACTTCTCATGATGTCGATAAAGTGCTCCTCCTGCCGTCCCAATTGAATTTGGAATCTACAAAGGATCATAGTCGTGAGAAATAG 4050 0.3916 MFAIASPSSSSSSRKYEVFLSFRGEDTRRSFTSHLHTALCVGDIETYIDYELPKGDDISQSLMQAIQDSSISMVVFSENYASSKWCLNELLQILRCKQHQAQIVVPIFYEIDPSHVRNQKGTYEKAFSEHFKKNPEKVEEWRQALFEIASLAGWDSGNYRDEAELIQNIVMDINKKLNHGSPTTVLDNIVGIDYENLDHIELLLKGFSMVGIWGMAGIGKTTMAKAMFTKLHSQFHSCCFLENFREESEKHGLKYVHDKLFHELLKDTSLKRLSHRKVLIVLDDVSNTRQLDYLESEAPLLGRGSKVIITSRDKHVLDGRVERIHEAKALSYNNSLKVFNLKAFCKDGYKSEYEELVERALAYAQGVPLALTILGSFLYSRTVKEWESALRKLERTPHRDIQAVLKLSYDGLDDEDKQIFLDIACFFKGELRSYVEAMLEYCGFEASNGLRTLMDKALISVSCDAVWMHDLIQSMAFDIIHQECITNPGGRSRLWKPDEIYDVLKNDRGNDAIQAISLDLSQIKDLELSADVFRKMPNLRFLKFHYSHGHEGSCTVNLSSGLESLPNSLRCLQWDNFPSKCLPLSFCAEKLVVLRMQGSHLEKLWDGMPNFVKLREIDLAGSKQLIELPDFSTAQNLKQADLTDCESLRHLHPSILSLPRLRDLKLCDCRNLKSLKCESPSKSLLHLDVCGCSSLKEFSFSSDKMEYLSLEGTCVEILDFSIGRMEKLKGLCLNGSTLKNLPINDICYMRSLEELHLYDCGGTIDKSKLHGLFDALLSLQTIDLSGTCKLTELPNNTKHLSRLQHLNVSGCKDLQSLPELPPSIEVLDAVECTSLKTLQFTSHIESSLSTDEITPGSNFKHLSNLERIKLSNCRRLRSLPELPPFFEHIDAQGCISLETHVMESAYFLLRRLVYAQKEGCIYYSGRKAPGWFRFNQAVEASKNITIELPFPTSDLIGFIFCCVLSRYPPTYFECKLYVGDGFPWITTSFMGNMTNLDSHQVFLWCRPCTFRGFHNKMDDQNTNYRPKLLFEFSLVAESGDVDGVIEECGVLPIYASEYPNFIQQMELQSNLGTQKETCHDADENSFNGILKYASFSLNQGKCGNFEGSLIPEWFTYKSSTMNYDLSEVRIGVQFALDFDNLMGFIFCFVIPQFSSKKRDECHSSCYFNLHDLSVSSDRSEDRSWIYGNNWKGPLGWHYSMVKLNSDNVFLWYDPLYSELILQKLRKKGKGHDEELEFKFHFGDYYTNNCNSEEYNCWIKECGVRPIHVSEYKNFLLQQKKLKGGMKKKRPRNIDDDQYQLPLTKKLKESSIIQSIPQNPESKTSHDVDKVLLLPSQLNLESTKDHSREK 1349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00030 1349 SMART till_3 15 151 IPR000157 GO:0007165
Pral4025g00030 1349 Gene3D - 12 175 IPR035897 -
Pral4025g00030 1349 Pfam TIR domain 15 191 IPR000157 GO:0007165
Pral4025g00030 1349 SUPERFAMILY L domain-like 468 898 - -
Pral4025g00030 1349 Gene3D - 329 413 IPR042197 -
Pral4025g00030 1349 Pfam C-JID domain 1106 1269 IPR045344 -
Pral4025g00030 1349 ProSiteProfiles TIR domain profile. 14 177 IPR000157 GO:0007165
Pral4025g00030 1349 Gene3D Ribonuclease Inhibitor 510 698 IPR032675 -
Pral4025g00030 1349 Gene3D Ribonuclease Inhibitor 704 908 IPR032675 -
Pral4025g00030 1349 Gene3D - 176 324 IPR027417 -
Pral4025g00030 1349 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 699 IPR044974 GO:0006952
Pral4025g00030 1349 Pfam NB-ARC domain 208 409 IPR002182 GO:0043531
Pral4025g00030 1349 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Pral4025g00030 1349 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 179 - -
Pral4025g00030 1349 PRINTS Disease resistance protein signature 364 378 - -
Pral4025g00030 1349 PRINTS Disease resistance protein signature 272 286 - -
Pral4025g00030 1349 PRINTS Disease resistance protein signature 860 876 - -
Pral4025g00030 1349 PRINTS Disease resistance protein signature 209 224 - -
Pral4025g00030 1349 Pfam Leucine Rich Repeat 590 607 IPR011713 -
Pral4025g00030 1349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 423 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00030 Pral-Chr4025 352440 358602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00030 11 806 WRKY Transcription Factor Family AT4G12020 32.121 6.72e-94 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00030 - - pcin:129289671 1038.87