Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00029 ATGGGTACTGCTTCTTCTACTTCAAGATCTTCCTCTCAATCAACTTATTCAAAGAACTATGATGTGTTCATCAGTTTTAGAGGAGAGGACACGCGCACAAATTTCACCAGCCATCTTCATTCTGCTCTCACCCACAAGTCCCTGAGAACCTTTATTGATTATGAGCTTCCCAAAGGCGATGATATCTCGGAATCTCTCATCCAAGCAATCAAGGATTCTAGTATATCTGTCGTGGTCTTCTCAGAGAACTACGCTTCCTCAAAATGGTGCTTGGATGAACTCGCCCAGATACTCCAGTGCAGGAAAGATTTAGGCCAGTTTGTTATTCCTGTGTTCTACAAGGTTGACCCATCAGATGTTCGCAAGCAGAAGGGGACTTACGAGGAGGCATTTGCAAAACATGAGAGAGATTTCAGGCACAACCAGGACAAGTTGAAGAAATGGAAAGATGCTCTTTTTGAAACTGCCAATTTAGCTGGATGGCACTCTCAATCCTTCAGGGACGAAGCTGAACTAATTCAGAACATTATTAAGGATGTTTTGCAAAAATTGGATCGTAAGTATCCAAGTACATTAGAAGGTCTTGTTGGAATTGATGAAAATTGTGAATGCATTGAGTTGTTACTGAGAAAATTTTCAATAATTGGAGTTTGGGGAATGGGTGGGATAGGTAAGACAACCATGGCTAAGGTTGTATTTGACAAACTATCTCCTCAATATCAAAGTTGCTGTTTCTTAGAAAATGTAAGGGAAGAGTCAGAAAAGCATGAATTAAAATATATACGTGATAAACTTGTTTCAGAGCTGCTTATGGAAGAAAATATCCATCTTACCCAACCGAAAGTTTTGGGATCTACTTTTGTTAGGAGAAGGCTTAGCTGCAGAAAAGTTTTCATTGTGCTAGATGATGTTAATAGTTCAAAGCAATTAGACTATCTCGCTAGAGAATGTGATTGCTTGGGGCAAGGTAGTAAAGTCATCATAACAACAAGAGATAAGCATATGCTTATTGGTAGAGTTAATGAAATATATGAGGCCAAGCCATTGAAGTATCAAGAATCCTTCAAGCTTTTCAACTTGAAAGCTTTTCACAATGATCATCCTGAAATTGGATATGAACAGCGATCAAAAAGGGTTGTTACTTACACCAAAGGCAATCCTTTAGCTTTAATAGTTCTGGGTTCTTTTCTTTACTCCAAAACTAAAGAAGAATGGGACAGTGCGTTAAGAAAATTCAAAAGGATTCCACATGAAGATATTCAGGAAGTGTTAAAATTGAGCTACAACGGATTAAACGATGAAGAGCAGGAAATATTTCTAGACATTGCGTGCTTTTTGAAAGGTGAACTTAAAGAACATATAATACAGCTATTAGACAGCTATGGATTCCATGCAAGAATTAGCATTAGAACCCTCCAAGATAAGGCTCTTATTACTGTGGGTGAAAGATTGTGGATGCATGATCTAATACAAGAAATGGGTTGGGAGATAGTTCGTCAAGAATGTATTAAAGAACCAGGAAGACGCACTAGATTATGGGACCCTAAGGAAGTCTATGATGTATTGAGAAGCAATCGGGGAACTGAAGCTGTCGAAGGCATAATCTTAAATGTGTCTCGAATTAAAGATATATACTTGGATGCCGACACCTTCAAAAAGATGACTAATTTAAGATTCCTGAAATTTTATTCCTTATGCAATACTGGATCATTCAATGTGCATCTTCAGAAGGGTCTTGAGTCTATTTCTGATAAATTAAGGTACTTTCAATGGGATGGGTACCCTTTGGGTTCTTTGCCATCAACTTTTTGTGCTGAGAGCCTTGTTGAACTGAAAATGCAATACAGCCATGTTCAAACACTTTGGGATGGCGTGCAGGATTTTGTAAATTTGAAGAGAATAGATCTTCGTTTTTCCAGAAAACTGAGACAGTTGCCTGATTTCTCCAAGGCCCATAATCTGGAATTGGTGAATCTATATTACTGTGAAAGTTTGCGTTATGTCCATCCATCTATCTTATCTCTCAAGAGCCTTGTTTCTTTGGATTTAGGCAAATGCAAAAACCTCGAGAGTCTCCAAAGTGATACTCATTTAAGATCTCTTAGAAAAGTCCTTGTTCATGACTGCCCTAATCTGAAGGAATTCTCTTTATCATCCAAAGAACTAAGATGTTTATTTTTAGGGTCAACTGGTATAGAAATTCTACACCCATCAATCGGAAGTCTTGCTAAGCTTAGAAGTCTTCATCTCAATGGTTCAAAATTGAAGAATCTTCCACTAAAGGAGTTATGTTGCTTAAGATCTCTTGAGGATCTTGGTATCTACAACTATGCGTTTGACAAACATGTGCTGCAAATGCTATTTGATGCCTTGCCTGCTTTACGAATACTAAGCTTCCTGAATTGCTCTAACTTAACTGAGCTCCCAAACAACATCAAGCAACTCTCAAGACTTCAAAGGCTTCATTTGAGAAGTTGCAGAAATCTTCAATGTTTACCAGAGCTCCCCATGTCTGTTAAAGAGCTAGATGTCTCCAACTGCCCATCAATTTCAATCAACTGTAAGTTGTTGAAGGAAGTAGGAAAATTGGTTCCAGCACTGCACACCTCCTCAATTGGGCATCTTGCCAATCTCAAAACTCTACTTCTTGATGCTTCAAGTCTTGGCAATCTTCCAATAACTGAGTTATGTTGTTTTAGATCTCTCATGGAGCTTCGCCTTCGAAAATGCAGACACCTAGTGGATGAACCAAAGCTACATATACTATTTGAATCCCTGCAATGTCTACAAATACTGGATTTGGAGGACTGTTCTGGCTTAACTAAGCTCCCCAACAATATCAAACATCTCTCACGTAAGCTTCAGTTTTTACCCCAGCTTCCACGGTCTCTTAGAAATTTTATGGCCAGTAATTGCACATCATTAGAGAGAGTGTTTGCTTCAACAATTTCAAGGCTATTACGGGTAAATGGTCATAATTTCATTTCATTTCACAATTGTGAGAAATTGAACGAGCGTTCACGTTGTGCTATTGAGAAACATGTGGAGTTCTCATTGAAGCAAGCAGTACATAACAAGCAAAGATTTACAGTTTTTTATCCTGGAAACAGTGTTCCATTGTGGTTTGGCTATAATCGGTCAACAAAGGGTTTGGTAACCTTAGAACTGTCTTTGGCCTCTGATCATTTATTGGGTTTTGTTTTCTGTTCAGTCATTCCTCAATTCATCTCTAAGGAAAAAAATCAAGCGGCTGTGACCTGCAAGTGCTCCTTTGAAGAAGGTGAAGCAGTTGAATTTCAGATTTTTGATCCACAATATGCAGAATTCAGCTCAGATCACATTTTACTTTGTTGTGATCCATACTTCTCTAAATTAGTATTGGAGAGATTTAAAGGAGGCAATGGAAATGATGAAGACACCACTTCTAACAAAAAGGTTTTGTTTAGTTTCGTTTCTTGTGATGGCTTCATCGAAGAGTGTGGGATCTGCCCCATATATGCCTCTGAATATCAGAATTTCATTCAACAAAGGAAAATGAAGTGTGAGTTGGGCAAGAGGTCAAAGCGGCATCGAGATATTGATGAAATGGAGATGGAAATCTGTAAATTTGGAACCGGAGTTGGAAACTCTGATGGGGAAGAAACAGTGTCTCCATGCAAGAAATTGAAAATGGAGTTGTGTGCCCAGCCTAATGGACAAGAAGATATTGAAGAATTGGAAGCTTTGCTCATGAGAATCAAAATCAGCTAG 3750 0.3848 MGTASSTSRSSSQSTYSKNYDVFISFRGEDTRTNFTSHLHSALTHKSLRTFIDYELPKGDDISESLIQAIKDSSISVVVFSENYASSKWCLDELAQILQCRKDLGQFVIPVFYKVDPSDVRKQKGTYEEAFAKHERDFRHNQDKLKKWKDALFETANLAGWHSQSFRDEAELIQNIIKDVLQKLDRKYPSTLEGLVGIDENCECIELLLRKFSIIGVWGMGGIGKTTMAKVVFDKLSPQYQSCCFLENVREESEKHELKYIRDKLVSELLMEENIHLTQPKVLGSTFVRRRLSCRKVFIVLDDVNSSKQLDYLARECDCLGQGSKVIITTRDKHMLIGRVNEIYEAKPLKYQESFKLFNLKAFHNDHPEIGYEQRSKRVVTYTKGNPLALIVLGSFLYSKTKEEWDSALRKFKRIPHEDIQEVLKLSYNGLNDEEQEIFLDIACFLKGELKEHIIQLLDSYGFHARISIRTLQDKALITVGERLWMHDLIQEMGWEIVRQECIKEPGRRTRLWDPKEVYDVLRSNRGTEAVEGIILNVSRIKDIYLDADTFKKMTNLRFLKFYSLCNTGSFNVHLQKGLESISDKLRYFQWDGYPLGSLPSTFCAESLVELKMQYSHVQTLWDGVQDFVNLKRIDLRFSRKLRQLPDFSKAHNLELVNLYYCESLRYVHPSILSLKSLVSLDLGKCKNLESLQSDTHLRSLRKVLVHDCPNLKEFSLSSKELRCLFLGSTGIEILHPSIGSLAKLRSLHLNGSKLKNLPLKELCCLRSLEDLGIYNYAFDKHVLQMLFDALPALRILSFLNCSNLTELPNNIKQLSRLQRLHLRSCRNLQCLPELPMSVKELDVSNCPSISINCKLLKEVGKLVPALHTSSIGHLANLKTLLLDASSLGNLPITELCCFRSLMELRLRKCRHLVDEPKLHILFESLQCLQILDLEDCSGLTKLPNNIKHLSRKLQFLPQLPRSLRNFMASNCTSLERVFASTISRLLRVNGHNFISFHNCEKLNERSRCAIEKHVEFSLKQAVHNKQRFTVFYPGNSVPLWFGYNRSTKGLVTLELSLASDHLLGFVFCSVIPQFISKEKNQAAVTCKCSFEEGEAVEFQIFDPQYAEFSSDHILLCCDPYFSKLVLERFKGGNGNDEDTTSNKKVLFSFVSCDGFIEECGICPIYASEYQNFIQQRKMKCELGKRSKRHRDIDEMEMEICKFGTGVGNSDGEETVSPCKKLKMELCAQPNGQEDIEELEALLMRIKIS 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00029 1249 Gene3D Ribonuclease Inhibitor 716 863 IPR032675 -
Pral4025g00029 1249 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 186 - -
Pral4025g00029 1249 Pfam TIR domain 19 193 IPR000157 GO:0007165
Pral4025g00029 1249 Gene3D - 349 432 IPR042197 -
Pral4025g00029 1249 SMART till_3 19 158 IPR000157 GO:0007165
Pral4025g00029 1249 FunFam Disease resistance protein RPS4 528 720 - -
Pral4025g00029 1249 Pfam NB-ARC domain 213 428 IPR002182 GO:0043531
Pral4025g00029 1249 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 718 IPR044974 GO:0006952
Pral4025g00029 1249 Gene3D - 182 341 IPR027417 -
Pral4025g00029 1249 SUPERFAMILY L domain-like 485 853 - -
Pral4025g00029 1249 PRINTS Disease resistance protein signature 383 397 - -
Pral4025g00029 1249 PRINTS Disease resistance protein signature 291 305 - -
Pral4025g00029 1249 PRINTS Disease resistance protein signature 673 689 - -
Pral4025g00029 1249 PRINTS Disease resistance protein signature 214 229 - -
Pral4025g00029 1249 Gene3D - 16 181 IPR035897 -
Pral4025g00029 1249 Pfam Leucine Rich Repeat 608 626 IPR011713 -
Pral4025g00029 1249 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Pral4025g00029 1249 Gene3D Ribonuclease Inhibitor 864 1058 IPR032675 -
Pral4025g00029 1249 Pfam C-JID domain 1033 1169 IPR045344 -
Pral4025g00029 1249 ProSiteProfiles TIR domain profile. 18 184 IPR000157 GO:0007165
Pral4025g00029 1249 Gene3D Ribonuclease Inhibitor 522 715 IPR032675 -
Pral4025g00029 1249 SUPERFAMILY L domain-like 839 981 - -
Pral4025g00029 1249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 442 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00029 Pral-Chr4025 331570 338399 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00029 17 821 WRKY Transcription Factor Family AT4G12020 32.164 1.48e-103 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00029 - - pcin:129288608 2107.8