Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00027 ATGGCTGCTACTGCTGCTTCGTCATCTTCCTCCTCTTCCTCTTCACTTCCTCCCAAGAAACATGATGTGTTTCTTAGTTTCAGAGGCGAGGATACTCGCAGAACGTTCACCAGCCATCTCTTCACTGCTTTGTGCAAAAGGGGAATTCGAACCTACATAGATAATGAGCTCAGAAAAGGGGATGACATCTCAGACTCACTCATCCAGGCAATTAAAGATTCAAGTATAGCTGTGGTGATCTTCTCTGAGAACTATGCCTCCTCAAAATGGTGTTTGAATGAACTTATCCAGATCCTTTGGTGTAAAGAGGTCCAAGGACAGCTTGTTATTCCTGTCTTCTATCAAATCGACCCATCTGATGTGCGCAATCAGAGGCGAACTTACCTGGAGGCATTCGCAAAACATGAAAGAGACTTCAGGCTTAATCAAGAGAGGGTGAACAAGTGGAGACAAGCTCTTTTTGTAACTGCAAATTTGGCTGGCTGGGACTCTCGAAACTGTAGGGACGAATCAGAACTCATTCAAAACATTGTCAACCACGTTCAGCAAGAAATCACCCTCAGCTATCCAAACTCATCGATGGGTCTTGTTGGAATTGATGAAAATTGTGATGAGATTGAAAGGTTATTGGAAAAAGTCCCAATGGTTGGCATTTGGGGTATGGGTGGTATAGGCAAGACCACCATGGCTAAGTTTTTATTTACCAAACTCTCCTTCAAATTTGAGAGTTCTTGCTTTTTGGAAAATGTAAGAGAAGAGGTAGAAAAGCAAGGATTGACATACGTACGCAACAACCTTCTGTTTGAGCTACTAAAGGAAGAAAGTTTCCCTCATAGGTCACCTAATGTTGCAAGCAACGCCTCTGCAATGAGAAGATTAAGTTGTAAAAAAGTCTTCATAGTGCTTGACGATGTTAGTAGTTGGAAGCAATTAGAGTATTTAGCTCCATATTGTGAATACTTGGGACAAGGCAGTAAAGTCATCATTACAACAAGGCATAAGCAATTGCTTGTAATTGCAGGAGTTAACGCGATACATGAGGCCCGGCCTTTGAGCGCTCACAAGTCTGTTGAGCTCTTCAACTTCAAAGCCTTCCACTCGTACAATCCAAAAATTGGATATGAATCCCTTTCACAAAAGGTTGTTCATTACGCAAAAGGCATTCCGTTAGTTTTGGTAGTATTGGGCTCATTTCTTCGTTCAAAAACTCCCAAGGAATGGGATAGTGCATTGTCAAAACTAAAGAAGAGCCCCAATGAAGACATTCTACAAGTTCTGAAATTGAGCTTTGATGGATTAAATTTTGAAGAGAAAGAAATGTTTCTAGACATTGCATTTTTCTTGAATGGTGAAGCGAAAGAATATGTGATAACAGTATTAGAAAGCTTTGGTTTCCATGCGAGAATAGGGTTAGAAACCCTTGTAGATAGAACTCTTATAACTATTGATCAAAGCCAAGTACTCATGCATGACTTAGTAAAAGAAATGGGCTATGAAATTGTTCGTCAAGAATGTATTAAAGAACCTGGAAAACGAAGTAGATTATGTGATCCAGAAGAAGTCCATCATGTGTTGAAAAATAATACAGGAACTGATGCAATTGAAGGTATAGTATTGAATCTGTCCAAGATTAGACATTTACACTTGAGCATTCAAACCTTCAAAAAGATGTCTAATCTAAGATTTATAAAATTCTATTCGGTCAAGGATAGGAGATCTTGTAAGGTGGACCTGTCTTCTGGCCTTGAATTATTATCTGAGCAATTAAGGTACCTTCAATGGGATGATTATCCTTTGGAGTCTCTACCATCTTCATTTTGCCCAGAGAAACTTGTTGAACTTTGCATGCGAAACAGCCAAGTCAAAAAACTTTGGGATGGAGTGCAGGATTTTGTGAACTTGAGGGGAATAAACCTTGCAGGATGCAAACATTTGATAGAGCTACCTGATTTTTCGAAGGCACAGAATCTTCAATCGGTGAATCTTGCATCATGCGAAAGTTTGTGTCATGTTCACCCATCTATTTTATCCTTACAAAGACTTGTTACTTTGAATCTCAATAAATGCATTAAACTGAAGAAACTTCGTGGTGAGAATCCTCTACAGTCTCTCGAAGAGGTCCGTCTCAATTGGTGCTTTAGTTTGACAGAATTTTCATTGTCATCAGGACAAATCGCAAGTTTAGAACTAGAAACTACTCGCATTGAGTTATTGGACTCATCAATTGGGCATCTCAGTAAACTTAAACAGTTCAGTCTTGATGGTTCAAGACTGAAGAGTCTTCCAATAAATGAGTTATGCTGTTTAAGATCTCTAGAGGAGCTACGGCTTTCTAATTGTGAACAAGTAATTGACAAACTGAAGCTGCATATGCTGTTTGATGCCTTGCGGTTTTTACAAAAACTACATTTGGATGGGTGTCGGAACTTAACTGAACTTCCTAGTAATATCAAGCATCTTTCAGGGCTAAAAGTTCTTTCTTTGAAGAATTGTGATAGACTACAATCTCTACCAGAGCTTCCACCATCCATCGAAGAATTAGATGCCACCAACTGCCCGTCATTAGAGACAATAACTCTCACTTCTGAGATGGAATATTCATTGTCGCCAGAAGAAGGAACGGTCCCTTCAACACCCTGTTACTCAACTGGGTATCTTATGAAACTTAGAAAGCTTCGCCTTAATGTCTCAAGTCTGATGAATTTTTCAACTGAGCAGTTATGTTATTTGAGATCTCTTAAGGAACTTACTCTTCTTGATTGCGGACTAGTGATTGATAAGTTAAAGTTGCACAAGTTATTTGATGCCTTGTGCTCTTTGGTAGACTTTTATTTGGCAGGATGTGGTAACTTGTATGAACTTCCTGACAACATCAACTCCTTATCATCATTATATTTATTGGGATTGGCAGGAAACAATGTAGAGTACTTGCCTTCTGGTGTCAAGCATCTTCTGAAGCTAGACTACATTTACTTGACCAATTGTAGGAGGCTTCGGTCACTGCCAGGACTTCCCCCATTCACTAGATACGTAAAGGCCACTAATTGCTCATCACTGGACGTTGCATTCCCTTTAACAACTTCTAGGCCGCTACGGAAATATCTGGTGGAGTCCCTCTTTCTTGAAAATTGCTTGAAGTTGAGGGCGCATTCACTTTCCTGTATTGAGGAATATGCTTATTTGTCTTTGAAGCGAGCAGCATATCTCAATCGACCTGGTGCTTTTTGTTACCCAGGAAGAAAAATTCCAGAGTGGGTTAGATATAACCAGGCAACTAAGGCTTCAAGTTTCATAACCCTTGAACTCTCTTCAGCTGTGAACAACTTTTTGGGCCTTGTTTTCTGCTCGGTTCTTCCTCAGTTCCCATCAAACCCAAACTGTCAGAGTTACCTGAAATGCCAAATATATTTTGAAGATGGTGAAGAAGTCAAAGGCGAGGTTGACGATATGTGGATAACAGAGTTAAATTCGCATCATGTTTTTCTATGGTATGATCCAATCTACTCTGTATGGATTTTAAGGGAACTTATAGAAAGAGAGGATGATCAAGGCATTAGAGGTAACCCTAAGCTTTCGTTTGAGTTTTCTGTTGTCTCTTATGATGAGAATTACCGTGCAACCAAACATGATTTGATAGAAGCATGTGGAGTTTGCCCAGTATATGCTTCAGAATATCACAGTTTCCTTCAACGGATGGAATATGGGTTGGATTTGGATAGCCAAAAAAAGAGTGGTTGTGATGATGATGAGCATTCGCTTAGTGGAACTGTGGAATATGCTAGTTTCTCATTGAAGCAAGTATACGGCAATTTTGAAGGAGTATATATTTCTTCGCCTGAAAGGCCGAATACTCCAGTGGGGTTTCTAGACAAAACCACAAATACCCGCTCAGTTTATTTTCAACTTCCACATTTTGATGACTTGTTGGGTTTCATTTTTTGTTTTGTTATTCCTCAATTCTCCGCAAAAGAAAAGGATCGAAGTCACTCAAGCTGTCGGTGCAGCTGGGTATATGAGTTTGATGCCGATAAAAGGCTCTCTGAAAGTCATTATTTTGAAGGCCCCAGAGGATGGCATTATTCGATGACAGAATTGAATTCGGGTAATGCCTTCCAATGGTATGATCCCCTCTTTTGTGAATTCATATTAGATCAAGTTAGAAGAAAAAGAGTTGGGGATGTGGTGTTGCTTTCATTTGAATTTGAGTTTGGTGATTACTTGATTAAAGAATGGGGAATTCGCCCAATATATGCCTCAGAATATAACAGTTTCCTTCAACAAAAGGAATTGAAATTGGGGCTAGGCATGAAGAGACCTCGAGATACTTGTGATGATGAAGAACTGCATGCTCTAACAAAGAAATTGAAGGCATCTTCTATTTATTCTACCAACATTGACGAGTTACTACTCTCACTGTCTGAATTGAATTTGGAATTCGCGAAGGATGGCACCCTACAAAAATAA 4464 0.3954 MAATAASSSSSSSSSLPPKKHDVFLSFRGEDTRRTFTSHLFTALCKRGIRTYIDNELRKGDDISDSLIQAIKDSSIAVVIFSENYASSKWCLNELIQILWCKEVQGQLVIPVFYQIDPSDVRNQRRTYLEAFAKHERDFRLNQERVNKWRQALFVTANLAGWDSRNCRDESELIQNIVNHVQQEITLSYPNSSMGLVGIDENCDEIERLLEKVPMVGIWGMGGIGKTTMAKFLFTKLSFKFESSCFLENVREEVEKQGLTYVRNNLLFELLKEESFPHRSPNVASNASAMRRLSCKKVFIVLDDVSSWKQLEYLAPYCEYLGQGSKVIITTRHKQLLVIAGVNAIHEARPLSAHKSVELFNFKAFHSYNPKIGYESLSQKVVHYAKGIPLVLVVLGSFLRSKTPKEWDSALSKLKKSPNEDILQVLKLSFDGLNFEEKEMFLDIAFFLNGEAKEYVITVLESFGFHARIGLETLVDRTLITIDQSQVLMHDLVKEMGYEIVRQECIKEPGKRSRLCDPEEVHHVLKNNTGTDAIEGIVLNLSKIRHLHLSIQTFKKMSNLRFIKFYSVKDRRSCKVDLSSGLELLSEQLRYLQWDDYPLESLPSSFCPEKLVELCMRNSQVKKLWDGVQDFVNLRGINLAGCKHLIELPDFSKAQNLQSVNLASCESLCHVHPSILSLQRLVTLNLNKCIKLKKLRGENPLQSLEEVRLNWCFSLTEFSLSSGQIASLELETTRIELLDSSIGHLSKLKQFSLDGSRLKSLPINELCCLRSLEELRLSNCEQVIDKLKLHMLFDALRFLQKLHLDGCRNLTELPSNIKHLSGLKVLSLKNCDRLQSLPELPPSIEELDATNCPSLETITLTSEMEYSLSPEEGTVPSTPCYSTGYLMKLRKLRLNVSSLMNFSTEQLCYLRSLKELTLLDCGLVIDKLKLHKLFDALCSLVDFYLAGCGNLYELPDNINSLSSLYLLGLAGNNVEYLPSGVKHLLKLDYIYLTNCRRLRSLPGLPPFTRYVKATNCSSLDVAFPLTTSRPLRKYLVESLFLENCLKLRAHSLSCIEEYAYLSLKRAAYLNRPGAFCYPGRKIPEWVRYNQATKASSFITLELSSAVNNFLGLVFCSVLPQFPSNPNCQSYLKCQIYFEDGEEVKGEVDDMWITELNSHHVFLWYDPIYSVWILRELIEREDDQGIRGNPKLSFEFSVVSYDENYRATKHDLIEACGVCPVYASEYHSFLQRMEYGLDLDSQKKSGCDDDEHSLSGTVEYASFSLKQVYGNFEGVYISSPERPNTPVGFLDKTTNTRSVYFQLPHFDDLLGFIFCFVIPQFSAKEKDRSHSSCRCSWVYEFDADKRLSESHYFEGPRGWHYSMTELNSGNAFQWYDPLFCEFILDQVRRKRVGDVVLLSFEFEFGDYLIKEWGIRPIYASEYNSFLQQKELKLGLGMKRPRDTCDDEELHALTKKLKASSIYSTNIDELLLSLSELNLEFAKDGTLQK 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00027 1487 SUPERFAMILY L domain-like 489 860 - -
Pral4025g00027 1487 SMART till_3 20 159 IPR000157 GO:0007165
Pral4025g00027 1487 Pfam TIR domain 20 189 IPR000157 GO:0007165
Pral4025g00027 1487 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Pral4025g00027 1487 Gene3D - 351 434 IPR042197 -
Pral4025g00027 1487 SUPERFAMILY L domain-like 796 1025 - -
Pral4025g00027 1487 Pfam C-JID domain 1077 1224 IPR045344 -
Pral4025g00027 1487 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Pral4025g00027 1487 Pfam NB-ARC domain 214 420 IPR002182 GO:0043531
Pral4025g00027 1487 PRINTS Disease resistance protein signature 215 230 - -
Pral4025g00027 1487 PRINTS Disease resistance protein signature 292 306 - -
Pral4025g00027 1487 PRINTS Disease resistance protein signature 385 399 - -
Pral4025g00027 1487 PRINTS Disease resistance protein signature 818 834 - -
Pral4025g00027 1487 Gene3D - 186 343 IPR027417 -
Pral4025g00027 1487 Gene3D - 18 185 IPR035897 -
Pral4025g00027 1487 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Pral4025g00027 1487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 444 IPR027417 -
Pral4025g00027 1487 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Pral4025g00027 1487 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 719 IPR044974 GO:0006952
Pral4025g00027 1487 Gene3D Ribonuclease Inhibitor 853 1136 IPR032675 -
Pral4025g00027 1487 Gene3D Ribonuclease Inhibitor 700 852 IPR032675 -
Pral4025g00027 1487 Gene3D Ribonuclease Inhibitor 513 699 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00027 Pral-Chr4025 288153 293571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00027 745 997 WRKY Transcription Factor Family AT4G12020 27.059 1.89e-07 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00027 - - pcin:129289344 2083.15