Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00026 ATGGCTGCTACTGCTGCTTCGTCATCTTCCTCCTCTTCCTCTTCACTTCCTCCCAAGAAACATGATGTGTTTCTTAGTTTCAGAGGCGAGGACACTCGCAGAACGTTCACCAGCCATCTCTTCACTGCTTTGTGCAAAAGGGGAATTCGAACCTACATAGATAATGAGCTCAGAAAAGGGGATGACATCTCAGACTCACTCATCCAGGCAATTAAAGATTCAAGTATAGCTGTGGTGATCTTCTCTGAGAACTATGCCTCCTCAAAATGGTGTTTGAATGAACTTATCCAGATCCTTTGGTGTAAAGAGGTCCAAGGACAGCTTGTTATTCCTGTCTTCTATCAAATCGACCCATCTGATGTGCGCAATCAGAGGCGAACTTATATGGAGGCATTCGCAAAACATGAAAGAGACTTCAGGCTTAATCAAGAGAGGGTGAACAAGTGGAGACAAGCTCTCTTTATAACTGCAAATTTGGCTGGCTGGGACTCTCGAACCTGTAGGGACGAATCAGAACTCATTCAAAACATTGTCAACCACGTTCAGCAAAAGATTAACCTCAGTTATCCAAGTTCATTGATGGGTCTTGTTGGAATTGATGAAAATTGTAACGAGATTGAAAGGTTACTGGAAGAAGTCCCAATAATTGGACTTTGGGGTATGGGTGGTATAGGCAAGACCACCATGGCTAAGGCTTTATTTACCAAACTCTCCTTCAAATTTGAGAGTTCTTGCTTTTTGGAAAATGTAAGAGAAGAGGTAGAAAAGCAAGGATTGACATACGTACGCAACAACCTTCTGTCTGAGCTACTAAAGGAAGAAAGTTTCCCTCATAGGCCACCTAATATTGCAAGTAACGCCTCTGTTATGAGAAGACTAAGTTGTAAAAAAGTCTTCATAGTGCTTGACGATGTTACTAGTTGGAAGCAGTTAGAGTATTTAGCTCCATATTGTGAATACTTGGGACCAGGCAGTAAAGTCATCATCACAACAAGGCGTAAGCAATTGCTTGTAATTGCAGGAGTTAACGCAATACATGAGGCCCGGCCTTTGAGCGCTCACAAGTCTGTTGAGCTCTTCAACCTCAAAGCCTTCCACTCGCACAATCCAAAAATTGGATATGAATCCCTTTCACAAAAGGCTGTTCAGTACGCAAAAGGCATTCCGTTAGTTTTGGTAGTATTGGGTTCATTTCTTCGTTCAAAAACTCCCAAGGAATGGGATAGTGCATTGTCAAAACTAAAGAAGAGTCCCAATGAAGACATTCTACAAGTTCTGAAACTGAGCTTTGAGGGATTAAATTTTGAAGAGAAGGAAATGTTTCTAGACATTGCATTTTTCTTGAATGGTGAAGGGAAAGAATATGTGATAACACTATTAGAAAGCTTTGGTTTCCATGCGAGAATTGGGTTAGAAACCCTTGTAGATAGAACTCTTATAACTATTATTGATGGTAGTGAGGTCCACATGCATGACTTAATGAAAGAAATGGGCTATGAAATTGTTCGTCAACAATGTATTAAAGAACCTGGAAGACGAAGTAGATTACGTGATCCAGAAGAAGTTCATCATGTGCTGAGAAATAATACAGGAACTGATGCAATTGAAGGCATGGTATTAGATCTGTCCAAAATTAGACATTTACACTTGAGCATTGATACCTTCAAAAAGATGTCTAATCTGAGATTTCTAAAATTCTATTCACCCGAGGATAGGAGATCTTGTAAGGTGGATCTGTCTTCTGGCCTTGAATTATCTGAGCAATTAAGGTACCTCCAATGGGATGGTTATCCTTTGGAGTCTCTACCATCGTCATTTTGCCCAGAGAAACTTGTTGAACTTTGCATGCGAAACAGCCAAGTCAAAAAACTTTGGGATGGAGTGCAGGATTTTGTGACCTTGAGGAGAATAAACCTTGCGGGATGCAAACAATTGATAGAGCTACCTGATTTTTCGAAGGCACAGAATCTTGAATCGGTGGATCTTGAATCATGCGAAAGTTTGTGTCATGTTCACCCATCGATCTTATCGTTACAAAGACTTGTTACTTTGAATCTCGATAAATGCGTTAAACTGAAGAAACTTCGTGGTGAGAATCCTCTAAAGTCTCTCAAAGAGATTTATCTCAATTGGTGCTTTAGTTTGAGAGAATTTTCATTGTCATCAGGAGAAATCGCAAGTTTAGAACTAGAAACCACTCGCATTGAGATGTTGGACTCATCAATTGGGCATCTCAGTAAGCTTAAACAGTTCAGTGTTAATGGTTCAAGACTGAAGAGCCTTCCAATAAATGAGTTATGCTGTTTAAGATCTCTGCAGGAGCTACGGCTTTCTAATTGTGAGCAAGTAATTGACAAACTGAAGCTGCATATTCTGTTTGATGCCTTGCGGCTTTTACAAAAACTACATTTGGATGGGTGTCGGAACTTAATTGAACTTCCTAACAATATCAAGCATCTCTCAGGGCTAAAAGTTCTTTCTTTGAAGAATTGTGACAGACTACAATCTCTACCAGAGCTTCCACCATCCATCGAAGAATTAGATGCCGCCAACTGCCCATCGTTAAGGACAATAACTCTCACTTCTCAGATGGAATATTCTGTGTCACCAGAAGAAGGAATGATGGCTTTAACACCCTATCCCTCAATTGGGTATCTTATGAAACTTAGAAAGCTTCGCCTTAATGTCTCAAATCTGACGAACTTTTCAATTGAGCAGCTATGTTATTTGAGATCTCTTAAGGAGCTCACTCTTCTTGATTGTGGACCAGTGATTGGTAAGTCAAACCTGCTCCAGTTATTTGATGCCTTGCGCTCTTTCGTAGACCTTTATTTGGAAGGATGTAGTAACTTGCATGAGCTTCCTGACAACATGAGCTCCTTATCATCGTTATATTTACTGGGATTAGTACGAAGCAATGTCGAGTACTTGCCTTCCAGCATCAAGCATCTCCTGAAGCTAGACTACATTTACTTGACCAATTGCAAGAGGCTTCGATGTCTACCAGAACTTCCACCATTCACTAGATACGTGAAGGCCACTAATTGCTTATCGTTGGAGGTTGCGTTCCCTTTAACAACTTCTAGGCCGCAACGGAAATATCTATTGGAGTCCCTCTTTCTTGAAAACTGCTTGAAGTTGGAGCATTCACTTTCCAGCATGGAAGACTATGCTTATTTATCGTTGAAGCGAGCGGCGTATCTCAATCGAACTGGTGCTTTTTGTTACCCAGGGAGAAAAATTCCAGAGTGGGTTAGATATAACCAGACAACTAAGGCTTCAAGTTTCATAACCATTGAACTCTCTTCATCTGTGAACAGCTTGTTGGGCTTTGTTTTCTGCTCTGTTCTTCCTCAGTTCACGTCAAAGCCAAATTGTCAGAGTTACCTGAAATGCCAAATATACTTTGAAGACGGTGAAGAAGTCAGAGGCAAGGGTGACGATATGCCGATAACAGACTTAAATTCGCATCATGTTTTTCTATGGTATGATCCACTCTACTCTGTATGCATTTTAAGGGAACTTATGGAAAGAGAGGATCAAGGCATTAAAGGTAACTCGAAGCTTTCATTTGAGTTTTCTGTTGTCTCTTATGATGAGAACTACTGTACAACCAAACATGATCTGATAGAAGCATGTGGGGTTTGCCCCATATATGCTTCAGAATATCACAACTTCCTTCAACAAATGGAATTCGGGTTGGATTTGGGTAGTCAAAAGAAAAGTGGTCGTGATAACGATGAGCATTCACTTTGTGGAATTATGGAATATGCTAGTTTCTCATTGAAGCGAGTATACGGCAATTTTGAAAGTGTATATGTTTCTTCCCCTGAAATGCCAAATACTCCGGCGGGGTTTCTAGGCAAAACCACTGATACTCACTCAGTTTCTTTTCACCTTCGATATTTTGATGACTTGATGGGTTTCATTTTTTGTTTTGTTATTCCTCAGTTCTCCTCAAAAGAAAAGGATCGAAGTCACTCAAGCTGTCTGTGCTGCTGCATGTCTGATACTGAGGTTTATTTTGAAGGCCCAAGAGGATGGCATTATTCGATGACAGAATTGAATTCAGATAATGTCTTCCAATGGTATGATCCCCTCTTTTGTGAATTCATATTAGATCAAGTTAGAAGAAAAAGAGTTAGGCCTGTGAGATATCTTTCATTTAAGTTCGAGTTTGGTAATTGCTTGATTAAAGAAGGGAGAGTCCACCCAATATATGCCTCAGAATATAGCAATTTCCTTCAACAAAAGGAATTGAAATTGGGGCTAGGCATGAAGAGACCTAGAGATACTTGTGATGGGGAAGAACTACTTACTCCAACAAAGAAATTGAAGGCATCTTGTGTTCAATCTACCAACATTGATGAGTTACTACTCTCACTGTCCGAATTGAATTTGGAATTTGCGAAGGGTGTCACTCTACAAAAATAA 4434 0.4014 MAATAASSSSSSSSSLPPKKHDVFLSFRGEDTRRTFTSHLFTALCKRGIRTYIDNELRKGDDISDSLIQAIKDSSIAVVIFSENYASSKWCLNELIQILWCKEVQGQLVIPVFYQIDPSDVRNQRRTYMEAFAKHERDFRLNQERVNKWRQALFITANLAGWDSRTCRDESELIQNIVNHVQQKINLSYPSSLMGLVGIDENCNEIERLLEEVPIIGLWGMGGIGKTTMAKALFTKLSFKFESSCFLENVREEVEKQGLTYVRNNLLSELLKEESFPHRPPNIASNASVMRRLSCKKVFIVLDDVTSWKQLEYLAPYCEYLGPGSKVIITTRRKQLLVIAGVNAIHEARPLSAHKSVELFNLKAFHSHNPKIGYESLSQKAVQYAKGIPLVLVVLGSFLRSKTPKEWDSALSKLKKSPNEDILQVLKLSFEGLNFEEKEMFLDIAFFLNGEGKEYVITLLESFGFHARIGLETLVDRTLITIIDGSEVHMHDLMKEMGYEIVRQQCIKEPGRRSRLRDPEEVHHVLRNNTGTDAIEGMVLDLSKIRHLHLSIDTFKKMSNLRFLKFYSPEDRRSCKVDLSSGLELSEQLRYLQWDGYPLESLPSSFCPEKLVELCMRNSQVKKLWDGVQDFVTLRRINLAGCKQLIELPDFSKAQNLESVDLESCESLCHVHPSILSLQRLVTLNLDKCVKLKKLRGENPLKSLKEIYLNWCFSLREFSLSSGEIASLELETTRIEMLDSSIGHLSKLKQFSVNGSRLKSLPINELCCLRSLQELRLSNCEQVIDKLKLHILFDALRLLQKLHLDGCRNLIELPNNIKHLSGLKVLSLKNCDRLQSLPELPPSIEELDAANCPSLRTITLTSQMEYSVSPEEGMMALTPYPSIGYLMKLRKLRLNVSNLTNFSIEQLCYLRSLKELTLLDCGPVIGKSNLLQLFDALRSFVDLYLEGCSNLHELPDNMSSLSSLYLLGLVRSNVEYLPSSIKHLLKLDYIYLTNCKRLRCLPELPPFTRYVKATNCLSLEVAFPLTTSRPQRKYLLESLFLENCLKLEHSLSSMEDYAYLSLKRAAYLNRTGAFCYPGRKIPEWVRYNQTTKASSFITIELSSSVNSLLGFVFCSVLPQFTSKPNCQSYLKCQIYFEDGEEVRGKGDDMPITDLNSHHVFLWYDPLYSVCILRELMEREDQGIKGNSKLSFEFSVVSYDENYCTTKHDLIEACGVCPIYASEYHNFLQQMEFGLDLGSQKKSGRDNDEHSLCGIMEYASFSLKRVYGNFESVYVSSPEMPNTPAGFLGKTTDTHSVSFHLRYFDDLMGFIFCFVIPQFSSKEKDRSHSSCLCCCMSDTEVYFEGPRGWHYSMTELNSDNVFQWYDPLFCEFILDQVRRKRVRPVRYLSFKFEFGNCLIKEGRVHPIYASEYSNFLQQKELKLGLGMKRPRDTCDGEELLTPTKKLKASCVQSTNIDELLLSLSELNLEFAKGVTLQK 1477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00026 1477 Pfam Leucine Rich Repeat 610 629 IPR011713 -
Pral4025g00026 1477 Gene3D - 18 184 IPR035897 -
Pral4025g00026 1477 Gene3D Ribonuclease Inhibitor 874 1133 IPR032675 -
Pral4025g00026 1477 Pfam NB-ARC domain 208 420 IPR002182 GO:0043531
Pral4025g00026 1477 Pfam TIR domain 20 191 IPR000157 GO:0007165
Pral4025g00026 1477 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 719 IPR044974 GO:0006952
Pral4025g00026 1477 ProSiteProfiles TIR domain profile. 19 185 IPR000157 GO:0007165
Pral4025g00026 1477 Gene3D Ribonuclease Inhibitor 697 865 IPR032675 -
Pral4025g00026 1477 Gene3D Ribonuclease Inhibitor 512 696 IPR032675 -
Pral4025g00026 1477 FunFam Disease resistance protein RPS4 532 723 - -
Pral4025g00026 1477 Gene3D - 351 434 IPR042197 -
Pral4025g00026 1477 SUPERFAMILY L domain-like 539 860 - -
Pral4025g00026 1477 Gene3D - 185 343 IPR027417 -
Pral4025g00026 1477 SUPERFAMILY "Winged helix" DNA-binding domain 421 526 IPR036390 -
Pral4025g00026 1477 Pfam C-JID domain 1076 1222 IPR045344 -
Pral4025g00026 1477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 444 IPR027417 -
Pral4025g00026 1477 PRINTS Disease resistance protein signature 818 834 - -
Pral4025g00026 1477 PRINTS Disease resistance protein signature 215 230 - -
Pral4025g00026 1477 PRINTS Disease resistance protein signature 385 399 - -
Pral4025g00026 1477 PRINTS Disease resistance protein signature 292 306 - -
Pral4025g00026 1477 SMART till_3 20 159 IPR000157 GO:0007165
Pral4025g00026 1477 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 187 - -
Pral4025g00026 1477 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 162 IPR035897 -
Pral4025g00026 1477 SUPERFAMILY L domain-like 793 1004 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00026 Pral-Chr4025 277677 283082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00026 802 997 WRKY Transcription Factor Family AT4G12020 27.551 1.01e-07 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00026 - - pcin:129289344 2144.39