Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00025 ATGGGACTACGTAAATTAAGAGCAAAGATTAAAAGGAGCCATCTTTACACATTTGCTTGTCTAAGACGAACTCACACTGCACATGAGAATGCTCAAAACCTTCAAGGTCCTGGTTTTTCAAGAGTTGTACATTGCAACCACCCTCATCTCTCTGAGAAGAAGCCTCAGATTTACTGCCGGAATGATATATCAACTACAAAATACAATGTTGTAACATTTTTACCTAAAGCACTCTATGAGCAATTTCGACGGGTTGCTAATATATACTTCCTTGTGGCCGCATGCCTCTCAGCCTCTCCAATCTCACCATTTTCTCCAGTCAGCATGATTGCTCCTCTAGCATTTGTTGTTGGCCTTAGCATGGCAAAAGAAGCATTGGAAGATTGGCGCAGGTTTCGTCAGGATGTTAAAGTTAATCACCGGAATGCTAGTGTCCACAAGGGCAATGGTGTTTTCACTCTCAAACAATGGCAGGACATTGTGGTTGGGGATGTAGTAAAAGTAGACAAGGACCAATTTTTTCCTGCTGATTTGCTTTTCTTGTCATCCAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTGGATGGTGAGACAAACCTAAAGGTGAAAAGATCTTTGGAGGTTACCATGCTTCTATATAATGATGAATCTTTTAAAGATTTCACGGGAATAATTCGTTGTGAAGACCCAAATCCTAGTCTCTACACATTTGTAGGAAATTTTGAGTATGAACGTGAGGTTCATCCGATTGAGCCCAGTCAAATTCTCCTCCGAGATTCAAAGCTCAGGAACACTGATTTTATATATGGCGTGGTCATTTTCACTGGTCATGAAAGCAAAGTGATGCAGAATTCTACAAAATCTCCTTCAAAAAGGAGTAGAATAGAGAGAAAGATGGATTACATCATATACCTCCTATTCACTGTTCTTATTTTGATATCCTTGGTTAGTTCAGTAATATTCGCTGTAATCACTAGATTCCAAACAATAAATTGGTGGTATTTAATGCCCATGCAGTCAGAAGTCCTGTATGATCCCAATAATGCTCTATTGGCTGGGTTGAGTCATCTGGTTACTGCACTCATTCTTTATGGATATTTGATACCCATATCACTTTATGTTTCAATTGAGGTTGTGAAAGTTTTACAAGCAAACTTGGTTGAACAAGACTTGCATATGTATCACGAAGAAACTGGGACTCCTGCTTGTGCCCGAACATCAAATTTGAATGAAGAATTGGGTCAAGTGGACACTATTCTTTCTGATAAGACTGGAACTTTAACTTGCAATCAGATGGATTTTTTAAAGTGCTCCATTGCTGGTGCTGCATATGGTGTGAGTTCTAGTGAAGTTGAACTTGCTACAGCACAGCAGATGGCTCTTGAACTTGAGGAGGACCAGCAGGAGGAAAGTCTATCCAATACACCCACACATGAGGGTAAAGCATCTGTTTCGTGGGAAAATGTTGACCTGGAGACTGTTGTTACATCCAAGGGCGATGAGGCTCAGAAGGCTACTATAAAGGGTTTCAGATTTGAGGACGGTCGCCTCATGAACTGCAGCTGGTTGAAAGAGCCCAATCCTGATGTCCTTTTATTGTTTTTTCGGATATTAGCTGTGTGCCATACTGCCATTCCTGAGCTGAATGAGGAAACAGGAGCTTTAACTTACGAGGCTGAATCCCCTGATGAAGGGGCTTTCTTAGCAGCCGCAAGAGAATTTGGTTTTGATTTTTGTAAAAGAACTCAAGCAAGTGTTTTCATCCATGAAAAGCTTTCACCTTCAGAACAAGCTGTTGAAAGGGAGTACAAAATCCTGAATCTATTGGACTTTACTAGCAAAAGAAAGCGAATGACAGTGATTGTGCGTGATGAGGAAGGAAGTTTACTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGACTGGCGAAGAATGGAAAGACGTATTTAGAGGCCACAACCAAACATTTGAACGAATATGGAGAAAATGGTTTGAGAACATTGGCTCTAGCTTACAGAAAGCTTGATGAGGAAGAGTACAATGCTTGGAACTATGAGTTTCAAAAAGCCAAAACGACTGTTGGGCCTGACAGAGAGGCAGTGCTTGAGGAATTAGCTGAAAGAATGGAAAAAGAGCTCATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAAAATGGGGTCCCCCAATGTATTGATAAACTTGCACAAGCGGGTCTCAAGATCTGGGTTTTGACAGGGGATAAGATGGAAACTGCAATCAACATCGGTTTTTCTTGTAGTTTGCTTCGACAGGGCATGAAGCAGATCTGCATATCTATTCAAGAGGCAGACTCAAATTTTGACAAAGAGGCCATAAAGGAGAGCATTTTGAATCAAATCATCAATGCCTCACAAATGATAAAGCTGGAGAAAGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAGGCTCTTGCATATACTTTAGAAGATGACATGAAGCATCAATTTTTGGGATTGGCTGTTGATTGTGCCTCTGTCATCTGCTGTCGTGTGTCTCCCAAGCAAAAGGCACTGGTAACAAGGTTAGTTAAAGAAGGCACTGGGAAGACCACTTTAGGAATAGGTGATGGTGCAAATGACGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGTATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTCGCTATTGCCCAATTTAGATTTTTGGAACGACTTTTGGTGATCCATGGACACTGGTGCTACAAGAGAATAGCTCAAATGATATGCTATTTCTTCTACAAAAACATAGCTTTTGGGCTCACCATCTTTTATTTTGAGGCCATGACGAGCTTCTCCGGGCAATCAGTTTATGATGACTGGTACATGATATTGTTCAATGTTGTTCTTACATCATTACCTGTCATTTCACTTGGAGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCACTATATCAGCAGGGCCCGAGAAATTTGTTCTTTGACTGGTATAGAATATCGGGATGGATGCTCAATGGTCTTTTTTGCTCCCTCGTTGTCTTTTTATTCAACATCTGTATTTTTTATGACCAAGCCTTCCGAGGTGATGGCCGGACCTCTGACATGGCCGTTGTCGGTACCACGATGTTCACTTGCGTCATTTGGGCTGTCAACTGCCAGATTGCTTTCATCATTTGCCATGTAACATGGATGCAATACATATTTATCATAGGTAGTATAGCCTTTTGGTACATATTCCTGGTGCTATATGGCATGCTTTCGCCAACTTACTCAAAAACCGCCTACCAAATCCTGCTTGAAGTTCTCTCTCCTGCACCAGTGTATTGGTTGGTGACTTGTCTAGTAACAGTTACTTGTAATTTCCCTTATTACGCCCACATATGCTTCCAAAGATGGAAAAATCCCCTGGATCATCATATCATCAGAGAGATCAAGCACTACAAGAAGGACGTAGAGGACCAACGCATGTGGAAGAGGGAAAGGTCTAAAGCAAGACAGAAAACCAATATCGGATTCAGTGCAAGAGTTGAAGCTAAGATGAGAAACTTGAAGCAGAAGTTGCAGAAGAAGCAATCAACCTTGCCTTTCATGTCTTCTCCTTCTCCAGAAAGAAAATACAGATAA 3681 0.4118 MGLRKLRAKIKRSHLYTFACLRRTHTAHENAQNLQGPGFSRVVHCNHPHLSEKKPQIYCRNDISTTKYNVVTFLPKALYEQFRRVANIYFLVAACLSASPISPFSPVSMIAPLAFVVGLSMAKEALEDWRRFRQDVKVNHRNASVHKGNGVFTLKQWQDIVVGDVVKVDKDQFFPADLLFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLYNDESFKDFTGIIRCEDPNPSLYTFVGNFEYEREVHPIEPSQILLRDSKLRNTDFIYGVVIFTGHESKVMQNSTKSPSKRSRIERKMDYIIYLLFTVLILISLVSSVIFAVITRFQTINWWYLMPMQSEVLYDPNNALLAGLSHLVTALILYGYLIPISLYVSIEVVKVLQANLVEQDLHMYHEETGTPACARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGAAYGVSSSEVELATAQQMALELEEDQQEESLSNTPTHEGKASVSWENVDLETVVTSKGDEAQKATIKGFRFEDGRLMNCSWLKEPNPDVLLLFFRILAVCHTAIPELNEETGALTYEAESPDEGAFLAAAREFGFDFCKRTQASVFIHEKLSPSEQAVEREYKILNLLDFTSKRKRMTVIVRDEEGSLLLMCKGADSIIFDRLAKNGKTYLEATTKHLNEYGENGLRTLALAYRKLDEEEYNAWNYEFQKAKTTVGPDREAVLEELAERMEKELILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICISIQEADSNFDKEAIKESILNQIINASQMIKLEKDPHAAFALIIDGKALAYTLEDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKEGTGKTTLGIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVIHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAMTSFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVPSEVCLQFPALYQQGPRNLFFDWYRISGWMLNGLFCSLVVFLFNICIFYDQAFRGDGRTSDMAVVGTTMFTCVIWAVNCQIAFIICHVTWMQYIFIIGSIAFWYIFLVLYGMLSPTYSKTAYQILLEVLSPAPVYWLVTCLVTVTCNFPYYAHICFQRWKNPLDHHIIREIKHYKKDVEDQRMWKRERSKARQKTNIGFSARVEAKMRNLKQKLQKKQSTLPFMSSPSPERKYR 1226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00025 1226 Gene3D - 433 508 IPR023299 GO:0000166
Pral4025g00025 1226 MobiDBLite consensus disorder prediction 1201 1226 - -
Pral4025g00025 1226 SFLD p-type atpase 405 927 IPR044492 -
Pral4025g00025 1226 FunFam Phospholipid-transporting ATPase 588 719 - -
Pral4025g00025 1226 SFLD Haloacid Dehalogenase 405 927 - -
Pral4025g00025 1226 Gene3D - 717 916 IPR023214 -
Pral4025g00025 1226 NCBIfam HAD-IC family P-type ATPase 848 957 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pral4025g00025 1226 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Pral4025g00025 1226 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Pral4025g00025 1226 FunFam Phospholipid-transporting ATPase 119 289 - -
Pral4025g00025 1226 Pfam Phospholipid-translocating P-type ATPase C-terminal 904 1154 IPR032630 -
Pral4025g00025 1226 NCBIfam phospholipid-translocating P-type ATPase 58 1162 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pral4025g00025 1226 Gene3D - 118 289 - -
Pral4025g00025 1226 PRINTS P-type cation-transporting ATPase superfamily signature 876 895 - -
Pral4025g00025 1226 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Pral4025g00025 1226 SUPERFAMILY Calcium ATPase, transduction domain A 148 287 IPR008250 -
Pral4025g00025 1226 CDD P-type_ATPase_APLT_Dnf-like 60 1035 - -
Pral4025g00025 1226 SUPERFAMILY HAD-like 411 920 IPR036412 -
Pral4025g00025 1226 Coils Coil 449 469 - -
Pral4025g00025 1226 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 28 1180 - -
Pral4025g00025 1226 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 520 684 IPR023299 GO:0000166
Pral4025g00025 1226 Gene3D - 420 432 IPR023214 -
Pral4025g00025 1226 FunFam Phospholipid-transporting ATPase 721 916 - -
Pral4025g00025 1226 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1152 IPR023298 -
Pral4025g00025 1226 Pfam Cation transport ATPase (P-type) 543 647 - -
Pral4025g00025 1226 Coils Coil 1192 1212 - -
Pral4025g00025 1226 Gene3D - 565 698 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00025 Pral-Chr4025 268409 274274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00025 1 1218 Primary Pumps ATPases AT1G17500 70.878 0.0 1839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00025 K01530 - gmx:100819559 1901.33