Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00023 ATGGAACCTCGAGTTGGAAACAAGTTCCGTCTCGGCCGGAAGATTGGCAGCGGATCGTTTGGAGAGATCTACCTCGGTACTAATATTCAGACAAATGAAGACGTTGCAATTAAGCTTGAAAATGTCAAGACCAAGCACCCCCAACTGTTGTATGAATCGAAGTTGTATAAAATACTACAGGGAGGAACTGGAATCCCAAACTTAAAATGGTTTGGAGTTGAAGGAGACTACAATGTGCTTGTAATGGATTTACTGGGGCCTAGTCTTGAAGATTTATTCAACTTTTGCAGTAGGAAGTTGTCCCTCAAAACTGTTCTGATGCTTGCTGATCAGATGATAAATCGAGTTGAATTTGTCCATTCTAAATCATTTTTACATCGTGACATCAAGCCAGACAACTTCCTCATGGGTTTAGGGAGGCGTGCTAATCAAGTGTACGTCATTGACTTTGGCCTTGCTAAGAAATATAGAGACACTTCGACTCATCAGCATATCCCTTACAGAGAGAATAAGAATTTAACAGGAACTGCAAGATATGCTAGCATGAATACTCATCTTGGAATTGAGCAAAGCCGTAGAGACGACTTGGAGTCACTTGGATACGTTCTTACGTATTTTTTGAGAGGAAGCCTTCCTTGGCAGGGACTGAAAGCTGGCACTAAGAAGCAGAAGTATGAAAAGATTAGTGAGAAGAAAGTTTCTACTTCTATTGAGGCTCTCTGCCGTGGTTATCCATCAGAATTTGCATCATACTTCCATTATTGCCGGTCACTTCGGTTTGATGATAAACCTGATTATGCTTATCTAAAGAGGCTCTTCCGTGACCTTTTTATTCGTGAAGGATTTCAGTTTGATTATGTCTTCGACTGGACCATTTTGAAATATCAACAATCTCAAATTGCCACTCCTCCTGCCCGTGGTGTTGGTCCTGGTGTTGGACCAAGCTCTGGCATGCCACCAATGGTTGCAAATGCTGATAGACATCTAGGTGGGGAAGATGGTAGGCACACTGGTTGGACTTCATCAGATCCTACTCGGAGGAGAAACTCTGGACCCATTGCAAATGATGGCATCTTACCGAGACAAAAGGCCCCAGTTGCAAATGACTTGGCTGGTTCTAAAGATGTTACGTTGTCAAGCTCCAATCTCTTCCGGTCAAGTGGATCACAAAGACGAGGTGCTGTTTCTGGCAGTCGTGATGCAATTGTTAGCAGTGAGACTGAACGCTCTCACCATCTTCCTGTGGATGCAAGTCCTGGAGCACTTCGCAAAGTCTCTGGCGCTCAAAGAGGTTCACCTATTTTATCATCAGAACAAAACAGAACTTCATCTGGAAGAAACGTGTCAAATGCAAAGAATTTTGAGTCAACACTCAGAGGCATCGAGGGCCTGCATTTTAATGATGATAGGGTGCAGTATTAG 1422 0.4325 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEDVAIKLENVKTKHPQLLYESKLYKILQGGTGIPNLKWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYVIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLTYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPSEFASYFHYCRSLRFDDKPDYAYLKRLFRDLFIREGFQFDYVFDWTILKYQQSQIATPPARGVGPGVGPSSGMPPMVANADRHLGGEDGRHTGWTSSDPTRRRNSGPIANDGILPRQKAPVANDLAGSKDVTLSSSNLFRSSGSQRRGAVSGSRDAIVSSETERSHHLPVDASPGALRKVSGAQRGSPILSSEQNRTSSGRNVSNAKNFESTLRGIEGLHFNDDRVQY 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00023 473 MobiDBLite consensus disorder prediction 328 342 - -
Pral4025g00023 473 CDD STKc_CK1_delta_epsilon 8 282 - -
Pral4025g00023 473 MobiDBLite consensus disorder prediction 381 451 - -
Pral4025g00023 473 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4025g00023 473 MobiDBLite consensus disorder prediction 303 362 - -
Pral4025g00023 473 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pral4025g00023 473 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4025g00023 473 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Pral4025g00023 473 PANTHER CASEIN KINASE-RELATED 9 388 - -
Pral4025g00023 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral4025g00023 473 FunFam Casein kinase I isoform delta-like 1 308 - -
Pral4025g00023 473 FunFam Putative Casein kinase I 1 85 - -
Pral4025g00023 473 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4025g00023 473 Gene3D Transferase(Phosphotransferase) domain 1 1 306 - -
Pral4025g00023 473 MobiDBLite consensus disorder prediction 430 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00023 Pral-Chr4025 259530 265127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00023 7 223 EF-hand Containing Proteins AT2G17890 25.778 1.81e-12 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pral4025g00023 Pkinase 8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00023 K02218 - gmx:100778165 810.831