Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4025g00010 ATGGTTCTCTCGGGAACAGCCTCAAATGCAGAACTCGGCCCTACTGTCATTGCCGTTGATGACGACGTCAATAGCGTGTACGCTGTCAAATGGGCAATTCATAATCTTTTACAGAAGAACTCAGCTTCCACCCTCATTCACGTTCGGACTAAGAATTTACATCCTCATGATGTTGATTCTGTCCCTAAAGAAGGTCGTCCACCAACTGAAGAAGAATCAAAACAAGTTTTTCTTCCCTTCAGAGAATTTTTTGCACAAGAAGGGATCACAGCAAAGGAGTTGGTTCTGCACGGCAATGATGTTACGAGTACACTAACCGATTACATCATTGACCACTCTATCAGCAATATTGTTGTTGGCGCTTCCCATCGGAATGCTCTTACAAGGAAATATAAAGGGTTAGGTGTTTCAAACAGTTTAATGAGGTCCGTGCCAGAGTGCTACACAGTACATATTATATCAAAAGGAAAAGTGCTAAATATCCAGCCAACAGGTTTCCCTCAAAGCATAAGCATCATACCAACTACATCGATGGAAGACTCATACTACAATCCCCAGGGAAATTCACAACCGGATCATTTGCATAATCTTCTTCCTGATACTTCAGATTCTGAAGATATGAACAGAAAATCATTCAAACATTTTTGGCCAGGCTCAGGTCTTGATAGGGTTTATGCTGGTGAAAACAACGACACTGTGCAGGTGGTAACTCATGAGTCCTCCGAAGAGGCTAATTTATCAAAGAAAGGCTTGAGTATTGAAATGAGGCAATTAAGCCTAGAATTGAAAAAAACAATGGAGAAGTATAGCTCAGCCTGTAGAGAAGCCATCGCAGCAAAACAGAAGGTAATGGAGCTTGAACAGATTATGCAAGAAGAAGAACGCAACTTAAAACATGCAGAAATAAGGGCCATGCAGGAAGAGGAAGAGAGGAAGACAGAATCAAATATGTTGACTCATGATAATATTCAATGTAGAAAATTCGATGTCAAGGACATTGAAGTTGCAACTCGCTGCTTTAATAGTCATTTGAAAATTGGTGAAGGTGGATGCGGATCTGTTTATAAAGGTGTGCTTGATTTCACTGATGTTGCAATTAAGGTCTTGAGACCAGACATAGACCAAGGAGAGAAGCAATTTCAACAAGAGGTACTTATTTTGAGCACCATAAGGCATCCAAACATTGTTCTCCTGCTAGGTACCTGCCCAGAGTATGGATGCCTTGTGTACGAGTACCTGGAAAATGGCAGCTTAGAAGATCGCCTCTTCCAGAAAAATAACACTCCCCCACTTCCATGGAGAATTAGATTCAAAATAGCAGCAGAAATCGCCACCCGCCTTCTTTTCCTTCACAAGACAACACCCAAACCATTGGTGCACCGTGACCTCAAGCCATCAAACATTCTGCTGGATGGGAACTATGGGAGCAAGATAAGTGATGTTGGTTTGGCTCATCTTGTTCCTCCTTCTATACCTGACAAAACCACTGAGTATCACATAACAGCTGCAGTTGGTACATATTGTTATATTGACCCAGAGTATCAACAAACAGGATTATTGGGAGTAAAATCAGATATATATTCGCTAGGTATAATTCTGCTACAAATTCTTACTGCTGAGCCTCCTATAGGCTTATCTCTCCTTGTTGAGCAGGCCATCCAAGAAGGTACTTTTCAAGAGGTACTTGATGCAAGTGTGCCAGATTGGCCTGTTGAAGAGGCTTTATCTTGTGCTTTGTTGGCTTTAAAGTGCTGCGAGATGAGGAAAAGGGACAGACCAGACCTGGGTTCTGTTATTTTGCCAATGCTAAATCGACTCAGAGATCTGGGAGGAGCCATTGGAGGTGATGGCCTTCCTGCAAGCCAGGTACGAGAGCGAAGGTGGCAACCCTTCAAGTCCATCGCCAACCTATTGAGCTTCAATCGTAATTCCGAGAAGCCAGGCCTCTTACCACCAACAGGGAAGAAGCATTTGGGGGAAAAAAGGACATTTACAGGGGCTGCTTCTCTTTAG 2013 0.4277 MVLSGTASNAELGPTVIAVDDDVNSVYAVKWAIHNLLQKNSASTLIHVRTKNLHPHDVDSVPKEGRPPTEEESKQVFLPFREFFAQEGITAKELVLHGNDVTSTLTDYIIDHSISNIVVGASHRNALTRKYKGLGVSNSLMRSVPECYTVHIISKGKVLNIQPTGFPQSISIIPTTSMEDSYYNPQGNSQPDHLHNLLPDTSDSEDMNRKSFKHFWPGSGLDRVYAGENNDTVQVVTHESSEEANLSKKGLSIEMRQLSLELKKTMEKYSSACREAIAAKQKVMELEQIMQEEERNLKHAEIRAMQEEEERKTESNMLTHDNIQCRKFDVKDIEVATRCFNSHLKIGEGGCGSVYKGVLDFTDVAIKVLRPDIDQGEKQFQQEVLILSTIRHPNIVLLLGTCPEYGCLVYEYLENGSLEDRLFQKNNTPPLPWRIRFKIAAEIATRLLFLHKTTPKPLVHRDLKPSNILLDGNYGSKISDVGLAHLVPPSIPDKTTEYHITAAVGTYCYIDPEYQQTGLLGVKSDIYSLGIILLQILTAEPPIGLSLLVEQAIQEGTFQEVLDASVPDWPVEEALSCALLALKCCEMRKRDRPDLGSVILPMLNRLRDLGGAIGGDGLPASQVRERRWQPFKSIANLLSFNRNSEKPGLLPPTGKKHLGEKRTFTGAASL 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4025g00010 670 MobiDBLite consensus disorder prediction 183 205 - -
Pral4025g00010 670 ProSiteProfiles Protein kinase domain profile. 340 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4025g00010 670 PANTHER OS02G0152300 PROTEIN 16 618 - -
Pral4025g00010 670 SUPERFAMILY Protein kinase-like (PK-like) 316 598 IPR011009 -
Pral4025g00010 670 Pfam Protein kinase domain 342 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4025g00010 670 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 312 412 - -
Pral4025g00010 670 SMART serkin_6 340 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4025g00010 670 FunFam Os07g0541700 protein 413 503 - -
Pral4025g00010 670 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 133 - -
Pral4025g00010 670 Gene3D Phosphorylase Kinase; domain 1 291 412 - -
Pral4025g00010 670 Coils Coil 276 317 - -
Pral4025g00010 670 CDD UDM1_RNF168_RNF169-like 274 318 - -
Pral4025g00010 670 MobiDBLite consensus disorder prediction 645 670 - -
Pral4025g00010 670 Coils Coil 248 268 - -
Pral4025g00010 670 Gene3D Transferase(Phosphotransferase) domain 1 413 609 - -
Pral4025g00010 670 Gene3D HUPs 15 150 IPR014729 -
Pral4025g00010 670 CDD STK_N 14 156 - -
Pral4025g00010 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Pral4025g00010 670 MobiDBLite consensus disorder prediction 183 197 - -
Pral4025g00010 670 Pfam Universal stress protein family 16 144 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4025g00010 Pral-Chr4025 150287 155684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4025g00010 15 610 Receptor kinase-like Gene Family AT1G17540 42.941 2.95e-176 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pral4025g00010 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4025g00010 - - pcin:129290405 701.049