Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4016g00006 ATGCCCGGATGCTACTCTCATGAAGAGATATCATCCCTGGAAATGATTCTCAAGGATGAGGATGAATGTATAGTGGTTACTATGGCGGATATTGTAGATGTGAGATCTGATCGTGGATGGATGTACACATCATGCAAACAGTGTAGCAAGAAAGTGGTTCCAGATGGAGAAGGTTTCTTTTGCGAAAAGTGCCAAGCTATAGTAAAAGCTGTTATTCCCAGGTTCATGATGGACTGTGAGATACTGGATGACACTGGATCATGTCGTGTTTTAATTTTTGACCGAGAATTATTCAAACTGCTTGGGTGTTCAGCAGCAGAGTTGAAGGCACGTCAAACTAATCAGGATGACTCCGATGAAGGTATATTGTCATATATTCTTGAGCAGATATCTTGGAAGAGGTATTTGTTCAAGATACGTATTCCAGGAGATTATGTCAATGGGAATTCCAATGTGTGTGTAGCTACTCGGTTGACAAATGATAAAGCCATAATGCAGTCTTTCTTGAACACATCTTATGAAGACATTGCATCAGAGGGTTGTACTTCCGTTGGTCTCACAGAAGAAAAGAACACTGAGCAGTGCCTGATAGAATCATCAGACGGTGCAAGTTCTTCTGCTAATCAAACTGTGCATGCAAATTTCTCTGAATTATCAAAATTTGACTCAACCTCTACACACCAAGTGGCAAATACAATAGGCCCAGGTTTCGAAGCAATGAAGTCCATAGTAGAATCTAAAGTTGCAATTGTAAACACTGCCAATGTTGAGAAGGCAAACCCCTTTGGTGATCTCCCATCAGCTAATTGTCAAGTTGAGGTAGAGAGTAGCAAGCACAGTGCTGGTTTCATGGAAATCCCTTCTACTACGTCTGGACATAATGGTGCGAAGAACGGTACTAAAAATATGTTAAATCATCCACTTGGTGGAAATCTTGAAGCTGATGAGAATAATACATCATTTGCAAGACGCCGCAGAGCAAAACGCAAACAAATCCAGGAAGAATAG 1008 0.4087 MPGCYSHEEISSLEMILKDEDECIVVTMADIVDVRSDRGWMYTSCKQCSKKVVPDGEGFFCEKCQAIVKAVIPRFMMDCEILDDTGSCRVLIFDRELFKLLGCSAAELKARQTNQDDSDEGILSYILEQISWKRYLFKIRIPGDYVNGNSNVCVATRLTNDKAIMQSFLNTSYEDIASEGCTSVGLTEEKNTEQCLIESSDGASSSANQTVHANFSELSKFDSTSTHQVANTIGPGFEAMKSIVESKVAIVNTANVEKANPFGDLPSANCQVEVESSKHSAGFMEIPSTTSGHNGAKNGTKNMLNHPLGGNLEADENNTSFARRRRAKRKQIQEE 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4016g00006 335 Gene3D - 5 169 IPR012340 -
Pral4016g00006 335 CDD RPA1_DBD_C 8 152 IPR047192 -
Pral4016g00006 335 MobiDBLite consensus disorder prediction 318 335 - -
Pral4016g00006 335 MobiDBLite consensus disorder prediction 289 305 - -
Pral4016g00006 335 Pfam Replication factor-A C terminal domain 28 152 IPR013955 -
Pral4016g00006 335 MobiDBLite consensus disorder prediction 289 335 - -
Pral4016g00006 335 SUPERFAMILY Nucleic acid-binding proteins 10 152 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4016g00006 Pral-Chr4016 142049 144611 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4016g00006 17 148 Core DNA Replication Machinery Family AT5G61000 28.571 2.22e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4016g00006 - K07466 pcin:129299041 123.635