Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4009g00001 ATGAATGAGATTCTTGTTCTTGCTCTTGTTTTGCTCCAGATTTGTGCTCAGTTTGCAACTTCTGGTTCACCTGTTCACCGCCTTCCTGGTTTTGAAGGCCCTCTTCCTTTTCATCTCGAAACTGGGTATGTGGGAGTGGGAGACTCAGAAAAAGGAGGACAAGTGTTCTATTATTTCATTGAGTCAGAGAACAATCCACAGGAGGACCCTCTTATGCTTTGGCTCACTGGTGGCCCTGGTTGCTCTTCATTTTCAGGCCTCATTTTTGAAATAGGTCCGATCGCATTCAAAGTTGAGAAATACAATGGTACCCTCCCAAAATTGGTTCGGAGGCCTCAAGCGTGGACAAAGGCATGCAGCATAATTTTTGTAGATTTGCCTATTGGCAGTGGCTTCTCCTATGCAAATACCCCTTATCTTCAACGAGGTGACTGGACTTTAGTTAACCATGCCCATCAATTTATTAGAAAGTGGCTCATTGATCATCCCAGATTTTTGTCACATCAAGTTTATATTGGCGGTGACTCGTATTCTGGCATTCCCGTTCCTGCTATGGTTCAAAAAATTTCAAATGGAAATGAGAAGGGTATCCAGCCATGGATAAATCTCCAGGGATATGTGCTAGGAAATCCCCTCACAACAATGGAAGAAGAAAATTATTTGCCCTCATTTGCTCATGGAATGGCGCTTATTTCTGATGAACTTTATATGTCGTTGAAGAAAAATTGTAAAGGAAATTATATAAATATAGATCCAGAAAATAAATCATGTCTGAGAGACTTCAACATTTTACACGAGCTCATTTCAGGACTTAGTGAATATGACACTTTAAATCCCAAATGTGAAATGGCTTTGAATACGCCTCATGGATTTTTCAGTAGAAGATCTCTGATCAACAAATTTCGAACGACCCTAATTAGTTCTCGCCTTGCAAGGCCACCTTTAAGTTGCCAAAGTTATGTATATTTTCTCGGCTACGATTGGATTCAGGATAACAAAGTTCAGGAGGCACTACATATTCGAAAGGGCAGCAAAAGGAATTGGCAACGTTGTAATCCCTTCGATTATAGTTACGACATCACCAGTGCCTTTCCATATCATGCAAATCTAAGCCCAAAAGGCTTTAGATCTTTGATTTACAATGGAGATCATGACCCAATAGTTCCATTTATGTCGACTCAAGCATGGATCAGAGATTTAAACTACTCCATTGTTGAAGACTGGAGACCTTGGCTTGTTAATGGCCAGGTTGCAGGATATACGAGAAGGTATTCTAATAAGATGACATTTGCCACTGTAAAGGGTGCTGGACATATAACTCCGGAGTACAAGCCTGAAGAATCTTTTGCGATGTTCATTAGGTGGATATCTAATACGCCTTTGTGG 1386 0.4069 MNEILVLALVLLQICAQFATSGSPVHRLPGFEGPLPFHLETGYVGVGDSEKGGQVFYYFIESENNPQEDPLMLWLTGGPGCSSFSGLIFEIGPIAFKVEKYNGTLPKLVRRPQAWTKACSIIFVDLPIGSGFSYANTPYLQRGDWTLVNHAHQFIRKWLIDHPRFLSHQVYIGGDSYSGIPVPAMVQKISNGNEKGIQPWINLQGYVLGNPLTTMEEENYLPSFAHGMALISDELYMSLKKNCKGNYINIDPENKSCLRDFNILHELISGLSEYDTLNPKCEMALNTPHGFFSRRSLINKFRTTLISSRLARPPLSCQSYVYFLGYDWIQDNKVQEALHIRKGSKRNWQRCNPFDYSYDITSAFPYHANLSPKGFRSLIYNGDHDPIVPFMSTQAWIRDLNYSIVEDWRPWLVNGQVAGYTRRYSNKMTFATVKGAGHITPEYKPEESFAMFIRWISNTPLW 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4009g00001 462 Gene3D - 321 461 - -
Pral4009g00001 462 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 445 IPR001563 GO:0004185|GO:0006508
Pral4009g00001 462 SUPERFAMILY alpha/beta-Hydrolases 25 461 IPR029058 -
Pral4009g00001 462 FunFam Carboxypeptidase 363 458 - -
Pral4009g00001 462 FunFam Serine carboxypeptidase-like 11 19 461 - -
Pral4009g00001 462 Pfam Serine carboxypeptidase 29 458 IPR001563 GO:0004185|GO:0006508
Pral4009g00001 462 Gene3D alpha/beta hydrolase 20 290 IPR029058 -
Pral4009g00001 462 FunFam Carboxypeptidase 316 460 - -
Pral4009g00001 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Pral4009g00001 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Pral4009g00001 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 183 IPR001563 GO:0004185|GO:0006508
Pral4009g00001 462 PRINTS Carboxypeptidase C serine protease (S10) family signature 428 441 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4009g00001 Pral-Chr4009 33055 38979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4009g00001 19 47 Calmodulin-binding Proteins AT2G22960 72.414 1.11e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4009g00001 K16296 - gmx:100780069 595.89