Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4003g00002 ATGACGATGAGGATGATAGCGACAGCGTTCATCCTTGGCTCACCATCTTCACTGGCTTCTAAAAGTGAGGTCAATGACAGATGGCGGAGGATGCTATCTGCAGTCGATCCCACTCTCCATCTTCAATTTGCAATGGCGAAGAGTGCGTGGTATGGCAGGAGAAGCATTTTCTACGATGTCATTGTTGATGGTGACCAGTGGTGGCTTCTACGGTGGCCAGCAGACGTTTTTGTGGTGCGTGATGGGGTGGCAGTGGCTATCTTGGGTGGAGGTCTCATATCCATCATGATTGAATTTTTCTCAACTTTCTTTCAAAATCTGGTGCATTGGATAAGCCAGTGGGATATTTACACGCTCATATTTCTTGCTTTCTTGGCCGTTTTCGCCATCCCAAGTTATGCAAGGGTCTGCTTTGTCAAATATGGTTCCAACACACTCCCAGGTCCACCAGGCCTACCCTTGTTCGGCAATCTTCTGTGTCTTCATCCCCAGCTTCACTCTTACTTCACCTCTCTGTCTAAAATCTATGGTCCCATCTTTTCCCTCCGACTTGGTGCCAAACATATCATCGTCCTTTCCTCCCCTTCGCTGGCTCGTCAAGTGCTCAAAGACCATGACCTCACTTTCGCTAACCGCAGCGTCACCGTCGCCGGCAGGGTCGCATTCTACGACGGGAGCGACATACTTTGGACCCCTTATGGACCTGAGTGGCGGATGCTGAAGAAAGTGTTTGTGCAATGGATTGTCAGCAACTGCGCCACGGATTCTCTCTGTGCGCTCCGCCGCAAGGAGGTTCAAAAAACCGTGGGTTATTTGTATAGTCGGGTGGGATCTCCGGTGGATATTGGGCAGCAGATGTATCTTACAGTTTTGAACATCATAACGAACATGATATGGGGTGGGACGGCGGCGGAAGAGGATGATGAGATGATGATGAAGGGAGCAGAGTTCAGGAAAGTGGTGGCGCGCATTGTAGCACTGCTTGGGAAGCCCAACATATCGGACATATTTCCGTGGTTGGCTCTGTTTGATTTGCAGGGTGTGGAGCAACAAATGCGTTTAGCGGTTCAGCAGTTCGACCAGATCTTTGAGAAGGTGATTAAGCAGCGGTTGAAGAAGAAAGAAGAAGAGTATAGCAAGGATTTCTTAGGGTTTTTGTTGAAATTGAAGGGTGAACATGATTCCAAGACGCCACTCACCATCACCCAAGTTAAGGCACTTCTCATGGATATGTTGGCGGGTGGAACTGATACAACCGTGAACACAATGGAGTTTGCAATGGCTCAGATTTTAAACAATCCGAAGGTAATGAAGGGAATCCAAGAAGAACTAGAAACTGTAGTGGGAAGAGAAAACATGGTGCAAGAGTCCCATATCGGCAAACTACCATACTTGTTTGCTGTTATGAAGGAAACTCTCAGGTTGTACCCTGTTGGTGCCCTATTAGTTCCTCATTGTCCAAGTCAAGCCACAAACGTGGAAGGCTACAAAATCCCAAGAAGCTCTCGTGTGTTTGTGAATGTGTGGGCCATACATAGAGACGCTTCGGTTTGGGACAATCCTCTTTGCTTTGATCCTACCAGGTTCTTGGATGCTAAATGCGATTATAGAGGGAATGACTTCAATTATTTACCATTTGGGTCTGGACGAAGAATTTGTGCAGGAATAGCTCTGGCTGAGAGGAACTTTATGTATTTGATGGCAACGTTAATCCATTTGTTTGATTGGAGGGTACCCGAAGACCAAAAGTTAGATGTGTCTGAGAAGTTTGGTATTCTCCTCAAGAAGAAAACACCTTTGGTTGTCATCCCCACACCACGCTTATCTAACTCAGCCCTTTATTTGTAG 1848 0.4697 MTMRMIATAFILGSPSSLASKSEVNDRWRRMLSAVDPTLHLQFAMAKSAWYGRRSIFYDVIVDGDQWWLLRWPADVFVVRDGVAVAILGGGLISIMIEFFSTFFQNLVHWISQWDIYTLIFLAFLAVFAIPSYARVCFVKYGSNTLPGPPGLPLFGNLLCLHPQLHSYFTSLSKIYGPIFSLRLGAKHIIVLSSPSLARQVLKDHDLTFANRSVTVAGRVAFYDGSDILWTPYGPEWRMLKKVFVQWIVSNCATDSLCALRRKEVQKTVGYLYSRVGSPVDIGQQMYLTVLNIITNMIWGGTAAEEDDEMMMKGAEFRKVVARIVALLGKPNISDIFPWLALFDLQGVEQQMRLAVQQFDQIFEKVIKQRLKKKEEEYSKDFLGFLLKLKGEHDSKTPLTITQVKALLMDMLAGGTDTTVNTMEFAMAQILNNPKVMKGIQEELETVVGRENMVQESHIGKLPYLFAVMKETLRLYPVGALLVPHCPSQATNVEGYKIPRSSRVFVNVWAIHRDASVWDNPLCFDPTRFLDAKCDYRGNDFNYLPFGSGRRICAGIALAERNFMYLMATLIHLFDWRVPEDQKLDVSEKFGILLKKKTPLVVIPTPRLSNSALYL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4003g00002 615 Gene3D Cytochrome P450 139 604 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS P450 superfamily signature 544 553 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS P450 superfamily signature 553 564 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS P450 superfamily signature 414 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 Pfam Cytochrome P450 147 599 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 SUPERFAMILY Cytochrome P450 147 607 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 CDD CYP76-like 173 604 - -
Pral4003g00002 615 FunFam Predicted protein 412 602 - -
Pral4003g00002 615 PRINTS E-class P450 group I signature 507 531 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS E-class P450 group I signature 543 553 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS E-class P450 group I signature 423 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS E-class P450 group I signature 553 576 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS E-class P450 group I signature 403 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS E-class P450 group I signature 289 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS E-class P450 group I signature 173 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS E-class P450 group I signature 197 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 PRINTS E-class P450 group I signature 466 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4003g00002 615 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 546 555 IPR017972 GO:0005506|GO:0016705
Pral4003g00002 615 PANTHER OS08G0547900 PROTEIN 119 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4003g00002 Pral-Chr4003 31318 42600 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4003g00002 147 615 Cytochrome P450 AT4G12300 53.684 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4003g00002 - - gmx:100787507 615.15