Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3998g00019 ATGAATTCTGTTCATTTCCTGGTTTCTCTGCTTCTTCTCTTGCTCGCATTTCCTAGTCTGCAATCTGTTCGAGGAAATGCAGAGCTCAGAGCTTTGATGGGGTTGAAGTCGTCTCTGGATCCAGAGGGCAAGGTTCTTGGTTCTTGGACTAGTGATGGCGAGCCGTGTAGTGGCTTGTTTGAAGGGATAGCATGCAACGAGCACAGGAAAGTGGCAAACATTTCGTTGCAGGGAAAGGGGCTCTCAGGATGGCTCTCTCCTGCAGTGGCTGAACTCAAGTGTTTGTCTGGTTTATACCTGCACTACAACAATCTCTCTGGAGAGATCCCCAGTGAGATTTCAAATCTCACTGATTTGATTGATCTCTATCTTGACTTTAATAATCTGACTGGAAGCATACCTCCTGAGCTCGGCAACATGCCCAATCTCCAAGTGCTGCAGTTAGGATATAACCAGCTCGTGGGAACTATACCAAAAGAGATGGGCTCCTTGAAGCAGCTTACTGCCTTAGAATTGCAACGTAACAAATTAACTGGTAAAATTCCTCTGAGCTTGGGGAATTTGGAGAAGCTAAGGATGCTAAATCTGAGTTTTAACAGCTTCAATGGTTCAATCCCCGCTACACTAGCTGATCTTGCAAACTTGCAAGTTCTTGATATTCGAAACAATTCTCTATCAGGAAGGGTTCCTACTGCTTTGAAGATATTGAAGGATGGATTCCAAGGTGCAAATAACCTGGATTTATGTGGACGTGGGTTTTCTACTTTGAAAGCTTGCAGCAATGATCCAACTTTAAATCCTAACCAGATTGGCACTTCAAATCCAACCACAGAAAGTATTCCTGCAAAGGATTTTCCTGAACCTGCGAATTTTCAGCTGCATTGTAACCAGACCCATTGCTCAAAATCAAGAATGTTTCCTCAAGCACTCATTGCAGCAAGTGTTATAACAGTCATAATCACATTCATATGCGTTGGACTTTTTACTTTTCTCAGGTACCGTCGCCAAAAGCAAAGAATCACAAATTCATCAGAATCTTCTGAAGGGAAACTTAGTCCTGATCAGCCTAAAGAATTGTACAAAAGAAGTCCATCGCCACTCGTTAATCTTAATTACTATAATGGATGGGATCCAATGGCTGATGCTCAAAATGGAAACAGATTATCCCATGAATACCTAAACCGTTATAGGTTTAATGTGGATGAGATTGAATCTGCTACACAGTACTTCTCTGAGGCTAACTTATTAAGTAAAAGCAAATTATCAGCAGTCTACAAAGGAATCCTCAGGGATGGCTCCCTTGTGGCTATAAGAAGCATTAATGTGACATGCTGCAAGAGTGAGGAAACTGAATTTGTAGATGGATTGAACTTGGTACTTTCATTGAGACATGAAAACCTAGTTAGGCTCAGAGGTTTCTGTTGCTCAGCAAGTAGAGGTGAATGTTTCCTTGTCTTTGACTTTGCCCCTAAGGGTGACCTGTCTAAGTACCTTGACATGGAAGATGGAAGCGGTCAAGTTCTTGACTGGTCCAAGAGGGTTTCTATCATCAAGGGCATCGCTAAAGGTATTGGACATCTACACAGCAATGAAACAAACAAGCCTACAATGGTGCATCAAAATATTTCTGTTGAAAAGGTTGTCCTTGACCATCAATTCAACCCCTTGATTATGGATTCTGGCCTCCCAAAGCTTCTTGCAGACGATGCAGTTTTCTCAGCTCTGAAAGTAAGTGCTGCCATGGGATACTTGGCTCCAGAATACATTACTACTGGGAAATTCACTGAGAAAAGTGACATATATGCATTTGGGGTTATCATCCTTCAAGTAGTATCTGGGAAAACTGTCATAGGTAGTTCAATAAAGATGGCAGTTGAGTCATTCAGATTTGAAGATTTTGTCGATTCAAATCTGAAGGGACGATATGCGAAATCTGAAGCAGCAATGCTGGCGAAGCTTGCAGTTATGTGTACTCATGAGCTTCCCGACCAGAGGCCGACAATGGTGGAAGTGATTCAGGAGATGAATGCATTTCCTGCTCAACATACTTCTTGA 2055 0.4224 MNSVHFLVSLLLLLLAFPSLQSVRGNAELRALMGLKSSLDPEGKVLGSWTSDGEPCSGLFEGIACNEHRKVANISLQGKGLSGWLSPAVAELKCLSGLYLHYNNLSGEIPSEISNLTDLIDLYLDFNNLTGSIPPELGNMPNLQVLQLGYNQLVGTIPKEMGSLKQLTALELQRNKLTGKIPLSLGNLEKLRMLNLSFNSFNGSIPATLADLANLQVLDIRNNSLSGRVPTALKILKDGFQGANNLDLCGRGFSTLKACSNDPTLNPNQIGTSNPTTESIPAKDFPEPANFQLHCNQTHCSKSRMFPQALIAASVITVIITFICVGLFTFLRYRRQKQRITNSSESSEGKLSPDQPKELYKRSPSPLVNLNYYNGWDPMADAQNGNRLSHEYLNRYRFNVDEIESATQYFSEANLLSKSKLSAVYKGILRDGSLVAIRSINVTCCKSEETEFVDGLNLVLSLRHENLVRLRGFCCSASRGECFLVFDFAPKGDLSKYLDMEDGSGQVLDWSKRVSIIKGIAKGIGHLHSNETNKPTMVHQNISVEKVVLDHQFNPLIMDSGLPKLLADDAVFSALKVSAAMGYLAPEYITTGKFTEKSDIYAFGVIILQVVSGKTVIGSSIKMAVESFRFEDFVDSNLKGRYAKSEAAMLAKLAVMCTHELPDQRPTMVEVIQEMNAFPAQHTS 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3998g00019 684 Pfam Protein tyrosine and serine/threonine kinase 416 674 IPR001245 GO:0004672|GO:0006468
Pral3998g00019 684 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Pral3998g00019 684 SUPERFAMILY Protein kinase-like (PK-like) 386 675 IPR011009 -
Pral3998g00019 684 SUPERFAMILY L domain-like 29 236 - -
Pral3998g00019 684 Gene3D Transferase(Phosphotransferase) domain 1 489 681 - -
Pral3998g00019 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 73 676 - -
Pral3998g00019 684 Pfam Leucine Rich Repeat 214 233 IPR001611 GO:0005515
Pral3998g00019 684 FunFam Protein NSP-INTERACTING KINASE 2 489 679 - -
Pral3998g00019 684 ProSiteProfiles Protein kinase domain profile. 410 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3998g00019 684 FunFam Protein NSP-INTERACTING KINASE 2 25 174 - -
Pral3998g00019 684 CDD TM_EGFR-like 311 339 - -
Pral3998g00019 684 SMART LRR_typ_2 212 242 IPR003591 -
Pral3998g00019 684 SMART LRR_typ_2 92 116 IPR003591 -
Pral3998g00019 684 SMART LRR_typ_2 140 164 IPR003591 -
Pral3998g00019 684 SMART LRR_typ_2 188 211 IPR003591 -
Pral3998g00019 684 FunFam Protein NSP-INTERACTING KINASE 2 381 488 - -
Pral3998g00019 684 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Pral3998g00019 684 Gene3D Ribonuclease Inhibitor 142 301 IPR032675 -
Pral3998g00019 684 MobiDBLite consensus disorder prediction 339 363 - -
Pral3998g00019 684 Gene3D Phosphorylase Kinase; domain 1 378 488 - -
Pral3998g00019 684 Pfam Leucine rich repeat 122 177 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3998g00019 Pral-Chr3998 415218 419033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3998g00019 7 523 Miscellaneous Gene Families AT4G22730 58.083 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pral3998g00019 PK_Tyr_Ser-Thr 1.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3998g00019 - - pcin:129311672 1202.96