Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3998g00006 ATGACAGCTTTCCCACCGGCTCTCTTTCAGAATCTGATGGAGTCCCTAACCCAGTGGGATTCTCTCACACCTCTGTTTCTTGCTTTTTGTGGCATTCTCGCCGTCGCCTGGTATGCCTGGATCTGCTTCACCAAACCCAGCTCTAAGCCACCTCCAGGTCCCCGAGGCCTCCCCTTGTTCGGCAATCTTCTCTCAATAGATCCAGAGCTTCACTCTTACTTTGCCTCTTTGTCTCAAACCTATGGTCCTATCTTCTCGCTCCGACTTGGATCCAAAACTGCCGTCGTCGTTTCATCTCCTTCAATTGCTCGCCAAGTGCTCAAAGACCATGACGTCACTTTCGCCAACCGTGACGTCCCTGTCGCCGGCAGGTTAGCCACCTACGGCGGAAAAGACATTGTTTGGACTCCTTACGGACCTGAGTGGCGGATGTTGAGGAAAGTTTGTGTGCTTAAGATGCTCAGCAACACCACCTTGGACTCCGTTTATGAGCTCCGTCGGAGGGAGATCAGAAAAACCGTGGGATATCTGTACAGCCGGGTCGGGTCTCCGGTGGATATTGGGGAGCAAATGTTTCTTACCATATTAAATGTGATTACGAACATGATGTGGGGTGGGACGTTGGAAGGAGATGAGAGGGCAGCTGTGGGGTCGGAGTTCAGGGAAGTGGTGGCGCACATGACGGCGCTATTGGGGAAACCCAACCTGTCGGACTTCTTTTCTGGGTTGGCCTGGTTTGATTTGCAAGGTGTTGAGAAACAGATGCGTTTATTGGCTCGGCGGTTTGATCAGATCTTCGAGAAGATGATTGAGCTGCGACTGAGGAAGAACAACGAAAGTGGAAGTGGAGAAAGTAAAGATTTTTTGCAGTTCCTGTTGAAATTGAAGGATGAAGAGGATTCTAAAACGCCACTCACCATGACCCACATTAAGGCCCTCCTAATGGATATGGTGGTGGGTGGAAGCGACACGTCTTCCAACACAATTGAATTTGCGATGGCTCATATCATAAATGAACCTAAGGTGATGAGAAGAGTCCAAGAAGAATTGGACAGCGTAGTGGGAAGACAAAACATGGTAGAAGAGTCTCACATTCACAAACTCCCATACCTATTTGCGGTGATGAAAGAAAGTCTTAGGTTGCATCCTGCTCTTCCTCTATTAGTTCCTCATTGCCCAAGTGAAAGCACCACTGTGGGAGGCTACACTATCCCAAAAGGTTCTCGAGTGTTCATCAACGTGTGGGCCATACATAGGGACCCTACCATTTGGGTCAATCCTCTAAAGTTCGACCCCACAAGGTTCTTAGATTCTAAATGGGATTTTAGTGGGAATGACTTTGAGTATTTTCCATTTGGGTCTGGACGAAGAATATGCGCAGGAATAGCCATGGCTGAGAGGACCTTTCTGTATTCTGTTGCAACCCTAATGCATTCATTTGACTGGAAGATTCCTGAAAGCCAAGAGTTAGATATGTCCGAGAAATTTGGTATTGTATTGAAAAAGAAAGTTCCTCTCGTTGCTATTCCCACGACCCGGTTGTCAAACACAGCTCTATATGAATAG 1566 0.4777 MTAFPPALFQNLMESLTQWDSLTPLFLAFCGILAVAWYAWICFTKPSSKPPPGPRGLPLFGNLLSIDPELHSYFASLSQTYGPIFSLRLGSKTAVVVSSPSIARQVLKDHDVTFANRDVPVAGRLATYGGKDIVWTPYGPEWRMLRKVCVLKMLSNTTLDSVYELRRREIRKTVGYLYSRVGSPVDIGEQMFLTILNVITNMMWGGTLEGDERAAVGSEFREVVAHMTALLGKPNLSDFFSGLAWFDLQGVEKQMRLLARRFDQIFEKMIELRLRKNNESGSGESKDFLQFLLKLKDEEDSKTPLTMTHIKALLMDMVVGGSDTSSNTIEFAMAHIINEPKVMRRVQEELDSVVGRQNMVEESHIHKLPYLFAVMKESLRLHPALPLLVPHCPSESTTVGGYTIPKGSRVFINVWAIHRDPTIWVNPLKFDPTRFLDSKWDFSGNDFEYFPFGSGRRICAGIAMAERTFLYSVATLMHSFDWKIPESQELDMSEKFGIVLKKKVPLVAIPTTRLSNTALYE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3998g00006 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Pral3998g00006 521 Gene3D Cytochrome P450 43 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS E-class P450 group I signature 102 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS E-class P450 group I signature 78 97 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 SUPERFAMILY Cytochrome P450 51 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 CDD CYP76-like 78 510 - -
Pral3998g00006 521 FunFam Cytochrome P450 - like protein 40 507 - -
Pral3998g00006 521 Pfam Cytochrome P450 51 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00006 521 PANTHER OS08G0547900 PROTEIN 22 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3998g00006 Pral-Chr3998 64351 68043 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3998g00006 21 520 Cytochrome P450 AT4G12320 58.465 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3998g00006 - - fve:101296377 755.362