Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3998g00005 ATGGATTACATTCCTGAAGATACTTTCACCTTTATGCTCGTCTCTATATGGGCCATTTTCGCAGTGACGTGGTACGCCTGGTTCTTCTTCTTCAAACCCAATTTTAAGCTTCCACCAGGTCCGCCGGGACTCCCTTTGTTCGGCAACCTTCTATCACTTGACCCAGAGCTTCACTCTTATCTGGCCACTCTGTCTCAAACCTATGGTCCCATCTTCACGCTGCGACTCGGAACCAAATATGCCTTCGTCCTCACCTCCCCTTCAATGGCTCGTCAAGTGCTCAAAGACCATGACGTCATTTTCGCCAACCGTGTCCTGCCGATCGCTGGCAAGAAAGCAGCCTACGGCGGGAGAGATATCGTTTCCAATCCTTACGGACCTGAGTGGAGAATGCTGAGAAAGGTTTGTGTATTTAAGATGCTCGGTAACTCCACGTTAGATTCTGTTTACAGCCTTCGTCGCATGGAGGTTCGGAAAACTGTAAGTTTTTTATATAGTCGAGCTGGGTCTGAGGTTAATATCGGGGAACAGATATTTCTTACTGTGTTAAATGTGATCACGAACATGATGTGGGGTGAGACGGTGGAAGGCGGTGAGAGGACCGTCGTAGGAGCCGAGTTCAGGGAAGTTGTGTCGGGCATTACGGAGATTTTGGGGACGCCGAACGTATCTGACTTTTTTCCTGGGTTGTCTTGGTTTGACGTGCAAGGTTTAGAGAGAAAGATAATAGTGTTGGCCAAGAGATTGGATCAGATCTTTGAGAAGATGATTGATAGGCGAATGAAGATGAATAGGGAGAATGAAAGTGATCAAGGAGGAGAGAGTAAAGACTTCTTGCAATTCTTGTTGAAACTCAAGGATCAACAAGATTCCAAGACCCCTCTCTCCATGATCCACGTGAAGGCCCTCCTCATGGATATGGTGGTAGGTGGAAGTGACACGTCCGCTAACTCAATTGAGTTTGCGATGGCTCATATATTAAACCATCAAGAGGTGATGGAGAGAGTCCAAGAAGAATTGGACAGTGTAGTGGGAAGAGAAAATGTGGTAGAAGAGTCTCATATTAGCAAACTCCCATACTTGCTTGCCGTTATGAAAGAAACACTGAGATTGCACCCTGCTCTTCCATTACTAGTCCCTCACTCTCCAAGTGAAACTACCACTGTGGCTGCCTACACAATCCCAAAAGGCTCTCGTGTGTTTGTGAATGTGTGGGCCATACATAGAGATCCTTCCATTTGGAACAATCCTCTACAATTTGATCCTTCAAGGTTTTTGGATTCTAAATGGGATTATAGTGGGAATGACTTCAATTACTTCCCATTTGGGTCTGGACGAAGGATGTGTGCAGGAATTGCCATGGCTGAAAGAACCTTTTTGTATTTTCTTGCAACGCTGATGCATTCATTTGATTGGGAATTACCTGACGGCCACAAGTTGGATATTTCTGAGAAATTTGGTATTGTTCTTAAGAAGAAAATACCTTTGGTCGCCATTCCCTTACCACGATTATTAGACTCAGGTCTTTATGAGTAG 1536 0.4518 MDYIPEDTFTFMLVSIWAIFAVTWYAWFFFFKPNFKLPPGPPGLPLFGNLLSLDPELHSYLATLSQTYGPIFTLRLGTKYAFVLTSPSMARQVLKDHDVIFANRVLPIAGKKAAYGGRDIVSNPYGPEWRMLRKVCVFKMLGNSTLDSVYSLRRMEVRKTVSFLYSRAGSEVNIGEQIFLTVLNVITNMMWGETVEGGERTVVGAEFREVVSGITEILGTPNVSDFFPGLSWFDVQGLERKIIVLAKRLDQIFEKMIDRRMKMNRENESDQGGESKDFLQFLLKLKDQQDSKTPLSMIHVKALLMDMVVGGSDTSANSIEFAMAHILNHQEVMERVQEELDSVVGRENVVEESHISKLPYLLAVMKETLRLHPALPLLVPHSPSETTTVAAYTIPKGSRVFVNVWAIHRDPSIWNNPLQFDPSRFLDSKWDYSGNDFNYFPFGSGRRMCAGIAMAERTFLYFLATLMHSFDWELPDGHKLDISEKFGIVLKKKIPLVAIPLPRLLDSGLYE 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3998g00005 511 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 FunFam Cytochrome P450 82C4 32 500 - -
Pral3998g00005 511 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Pral3998g00005 511 CDD CYP76-like 65 500 - -
Pral3998g00005 511 Pfam Cytochrome P450 38 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 Gene3D Cytochrome P450 31 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3998g00005 511 PANTHER OS08G0547900 PROTEIN 9 511 - -
Pral3998g00005 511 SUPERFAMILY Cytochrome P450 38 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3998g00005 Pral-Chr3998 41870 44913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3998g00005 5 510 Cytochrome P450 AT4G12300 56.140 0.0 605