Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3995g00011 ATGGAGTGCGAAGCTGCTTTCAAAACCAGTTCTCGCATGGACGCTGGCCTCAAATTCAGCCCCCGTGCGTTTCTCGAGGAGTTGTCCGCCTCCAATGTGCAGAATCTCACCCCTTCCGATCAGTTCTTTGTGGACGGCCTTCTTGACTTCTCCCACCACGACGCCCTCCCCGAGCAGCCGGACCAGCCACAACAACCCCTCCATGATTCTCTTCCTGTTTCTCCTCGCCTGCTCAACAAAACTCCTAAAACTTCTTCCGTCACGGACGATTTCGCCTCTGCCCAACTCATCCTTCCGGCGGATGAAGAAGCAGACTTGGAGTGGCTCTCTCATTTCGTCGAGGATTCCTTCTTCGAATACTCCGCTCCGTACCCTGCCGGAACATTGCCGGGAATTCCGAAGACCGAGACAGAGAAAGTACTTGAATTTGAAACCCCTGTTGCGGCCTCGCCCTGTTTCCCGACCCCAGTTCCTGCCAAGGCCAGAAGCAAACGAACACGAACCGGATTGCGGCTCATCGGCTTCGAAGCAAAGTCACCGAGCGTGAACAAACTAAAAAGGAGGACGGCTGATGAGGCGGCTGAGGGAGTGGCCGCTTCGACACCGCGGAAGTGCAGTCACTGCGGCGTGCAGAAGACCCCACAGTGGCGGACCGGACCGCTCGGAGCAAAAACGCTATGTAACGCGTGTGGGGTACGATATAAATCCGGCCGACTCTTGCCTGAATACAGACCCGCTTGTAGCCCGACATTCTCGAGCGAATTACACTCGAATCACCACCGGAAAGTGCTGGAGATGCGGCGGGAGAAGGAGATGAGCGAGATGGGGTCGGGTTTGGAGCCTCCGACTGTGGTCCCCAGTTTTTGA 867 0.564 MECEAAFKTSSRMDAGLKFSPRAFLEELSASNVQNLTPSDQFFVDGLLDFSHHDALPEQPDQPQQPLHDSLPVSPRLLNKTPKTSSVTDDFASAQLILPADEEADLEWLSHFVEDSFFEYSAPYPAGTLPGIPKTETEKVLEFETPVAASPCFPTPVPAKARSKRTRTGLRLIGFEAKSPSVNKLKRRTADEAAEGVAASTPRKCSHCGVQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRREKEMSEMGSGLEPPTVVPSF 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3995g00011 288 CDD ZnF_GATA 204 252 IPR000679 GO:0006355|GO:0043565
Pral3995g00011 288 FunFam GATA transcription factor 195 278 - -
Pral3995g00011 288 PIRSF Txn_fac_GATA_plant 10 281 IPR016679 GO:0003677|GO:0005634|GO:0045893
Pral3995g00011 288 Gene3D - 197 273 IPR013088 GO:0006355|GO:0008270
Pral3995g00011 288 PANTHER GATA TRANSCRIPTION FACTOR 31 273 - -
Pral3995g00011 288 MobiDBLite consensus disorder prediction 53 85 - -
Pral3995g00011 288 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 199 261 - -
Pral3995g00011 288 ProSiteProfiles GATA-type zinc finger domain profile. 199 235 IPR000679 GO:0006355|GO:0043565
Pral3995g00011 288 ProSitePatterns GATA-type zinc finger domain. 205 230 IPR000679 GO:0006355|GO:0043565
Pral3995g00011 288 SMART GATA_3 199 253 IPR000679 GO:0006355|GO:0043565
Pral3995g00011 288 Pfam GATA zinc finger 205 239 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3995g00011 Pral-Chr3995 45567 47407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3995g00011 4 288 C2C2-Gata Transcription Factor Family AT5G66320 46.313 5.84e-72 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pral3995g00011 GATA 3.8e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3995g00011 - - qsa:O6P43_033646 290.426