Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3995g00003 ATGCTGCTTTCTTGGACCCTTACCCTGCCCTCCTACGCCATACAATGGCTGATCCCTCCCCTGTTTGCTGCCATGCTCCTCTTCTGCCTCCTCAGGCTGCCTCCCAAGGCCTCCCGCTCAACCATGTCTCCGCCCGGCACCTCTGGCTGGCCTCTCCTCGGCGAGACTCTCCATTTCCTCGCCTCCGCCTACACCTCCGGCCCCCTCTCCTTCATGGACCGCCGCTCCTCCCTGTATGGGAGGGTGTTCAAGACGAACATATTGGGAAGTGAGGTGATAGTGTCGGCGGACGCGGAGGTGAACAATATGATATTGCAGAACCAGGGAAACGTGTTCGTGCCGGCGTATCCCAAGTCCATTAGGGAGCTGATGGGACAACACTCCATTCTGCAGATGAATGGCAACCTTCACAGGAAGCTGCATTCCCTCATTGCTGGATTCCTCCGATCCCCTCTTCTCAAATCTCGAATCGCCGCTGACATCCAACGCTCTGTCACCCACTGCTTAGCTTCTTGGAATCACCACCCATTCATTTACGTTCAAGATGAAGTCAAAAAGATTACTTTTACAATTCTGGTGAGAGTTCTGATGAGCATTGGTCCGGGAGAAGAATTGGAGGCGTTGAAGAGAGACTTCGAAGAATTCATAAAAGGCTTGATATGCATGCCCATCAAGTTCCCAGGAACAAGACTGTATAAATCTTTGAAGGCGAAGGAGAGAATGATGAAGACGGTGAGGAAGATAGTGGAGGAGAGGAAGACGGCGACGGAGGAGAAGGGAGCAGCGAGAGACGCGGTGGACGTGCTCTTAGGGGACAATGGGCTATCGGTGGAAGCAATCAGCGGCAATATCATAGAGATGATGATCCCCGGTGAGGAGACCCTCCCAACGGCTATGACCATGGCCGTCAAATTTCTCTCCGACTCTCCTCGCGCACTCTCCTCCTTGCGGGAGGAAAACATGCAACTAAAGAGGCAGAAGACAGATGGCGGTGATGATTACGAGTGGACAGATTACATGTCGCTGCCATTCACCCAGCATGTGATTAGCGAAACTCTGAGGCTGGCCAATATAGTGAATGCCATCTGGAGAAGAGCAACCAAAGATGTAGAAATTAAAGGGTACATAATCCCAAAGGGGAATTGTGTGGTGGCATCCCTAATGTCGGTTCACATGGACGGGACGATCTATGAAAAGCCCTTGGAATTCAATCCCTGGAGATGGGAGGAGCAGAGAATGGAAGGGAGCGGCGGGAACAGCAAGAAGGGGTGGTACAGTCCGTTCGGAGGAGGGCAGAGGCTGTGCCCGGGGCTGGAAGTGTCGAGGCTGGAGCTGTCCATATTTCTGCACCATCTGGTCACCACCTACACCTGGCATGCCCACCCTGACCACATCCTCTACTTCCCCACCGTCAAGATGAGCAGAAAGCTGCCCCTTACTGTTCGACCCCTCTAA 1455 0.5326 MLLSWTLTLPSYAIQWLIPPLFAAMLLFCLLRLPPKASRSTMSPPGTSGWPLLGETLHFLASAYTSGPLSFMDRRSSLYGRVFKTNILGSEVIVSADAEVNNMILQNQGNVFVPAYPKSIRELMGQHSILQMNGNLHRKLHSLIAGFLRSPLLKSRIAADIQRSVTHCLASWNHHPFIYVQDEVKKITFTILVRVLMSIGPGEELEALKRDFEEFIKGLICMPIKFPGTRLYKSLKAKERMMKTVRKIVEERKTATEEKGAARDAVDVLLGDNGLSVEAISGNIIEMMIPGEETLPTAMTMAVKFLSDSPRALSSLREENMQLKRQKTDGGDDYEWTDYMSLPFTQHVISETLRLANIVNAIWRRATKDVEIKGYIIPKGNCVVASLMSVHMDGTIYEKPLEFNPWRWEEQRMEGSGGNSKKGWYSPFGGGQRLCPGLEVSRLELSIFLHHLVTTYTWHAHPDHILYFPTVKMSRKLPLTVRPL 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3995g00003 484 PRINTS E-class P450 group IV signature 342 358 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PRINTS E-class P450 group IV signature 419 435 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PRINTS E-class P450 group IV signature 70 93 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PRINTS E-class P450 group IV signature 435 453 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PRINTS E-class P450 group IV signature 375 389 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PRINTS E-class P450 group IV signature 391 409 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 PANTHER CYTOCHROME P450 26 43 459 - -
Pral3995g00003 484 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 35 484 - -
Pral3995g00003 484 Coils Coil 238 258 - -
Pral3995g00003 484 CDD CYP90-like 75 483 - -
Pral3995g00003 484 SUPERFAMILY Cytochrome P450 43 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Pral3995g00003 484 Gene3D Cytochrome P450 34 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3995g00003 484 Pfam Cytochrome P450 44 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3995g00003 Pral-Chr3995 9834 15627 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3995g00003 44 456 Cytochrome P450 AT3G13730 52.267 4.66e-160 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3995g00003 K12637 - gmx:100812489 616.69