Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3994g00003 ATGGCTGAGGTTGCTGTATCAATAGTTGTTGAAAAGCTTTCAGAACTTCTAGTCGAACAAGCAGTGGGCGCAGTGGGCGTAGTTTCTGTACTTGATGGTTTGCGCAACGACGTAGAGAGGCTGAAGAATGAGTTACGATGGATGCAATGCTTTCTGAGGGATGCCGATGCTAAACAAGAAGAAAACCAGCTGGTCCGCTTGTGGGTTTCCGATATTAGAGATGTTGCTTTTGAAGCTGAGGAGCTAATAGAGATTTATGTTTACAAGGTAGCGTGTCAAAGCAGATGGTACAGAGTCTTTAGATCCTTACATCTCTACGAGGTCTCCAGAAAAATCGAGAAAATTCGAACTAGGATACATGATGTATCTACAAAGCGGGAAACCTACGGCGTTGTCAGAGAAACACAGGGGAAAATTATTACCAATGACCGGTTGAGGTACTGGAGACAGCCATGGCCCTATACTGAAGAGGAGTGTGTAATTGAGCTTGAAGATGACATGGAATTGCTGGTCAATCAACTGCTTACAGTGGACGCTGGGCGGGTGGTCTCTATAGTTGGTATGGGGGGTTTGGGCAAAACCACCTTAGCTAAGAAACTGTATAATCACAGCAAAATTCATAACCATTTTGATTGCAGAGCTTGGGTTTATGTGTCCAAAGAATACAGAAGAAGAGACATTTTGCTAGGAATTCTCAAGGATGCAGATGCTCGCGGTAGAAATGAGGTTGACGGACGGGAGAGATGGCGGGAGGAAGACATGGTGACCCGCCTGCATACTATCTTGGACGAGAAAAGGTATTTGGTAGTTCTTGATGATATTTGGAGCACGGAGGTTTGGGATAGCCTAGAATCTGCATTTCCCAGAGGGAAGATGGGTAGTAAAATTCTGCTCACAACTAGAGACATGAGAATAGGTAAGCACGCCGGTGGCGGCGGTAACCCTCATAAACTACGAACGCTGACTGAAGATGAGAGTTTGAGATTGCTGTGCCACAAAGCATTCCCCGGAATGAATAGCATCCCCCCGGAGTTGGAGAATCTTGCAAGGGATGTCGTAGTGAAATGTGGTGGTTTGCCTCTGGCTGTGGTGGTGGTTGGCGGTTTATTATCAAGAAAACTTCAATCAAACGAGGAATGGATGCGAGTGGCCAAAAATATCAGTTGGCATCTGCTAAATGAGCAAGACAGAATCCGATATATTTTGGCCCTGAGCTACAATGACTTGCCTTCTCACTTGAAATCATGCTTTCTCTACCTAGGTCTTTTCCCAGTCGGCATGAACATTCAGACGAAAAGGTTGATTCGCCTGTGGGTCGCAGAAGGTTTTTTACCGCAAGAAGGGGCAGAAACAGCAGAAGGTGTTGCTGAGAACTGCCTAAACGAGTTGATTGGTAGGTGCATGGTTCAAGTGGGCTCAGTAAGTTCGTTAGGCAAAGTTAAGACAATTCGCATCCATGATCTTCTCAGAGATATTTCCGTCTCCAAAGGGGAAGAGGAATATTTTCTCCGCATATATCTTGGGAGCCTGGAAAGTTCATCGGCATCTCAGCTAAATAGATCCCGCCGCCATGCCATACATTCTTGCTATGACCGTTATGACTTCTTGAAACACGATGCTTGTCATTCACGTTCCCTCCTCTTCTTCAATAGAGAATATAATGCAGATATAGTGAAGAAAATCAGGTTCTATGACCAGCAGTACAATATGAATTTCCTGCTAGAAAAGAAACTGAATTTAATTTTTAGCAAATTCAAGCTTCTCAGGGTTTTAGAGTTAGACGGTGTTCGGGCTGTTCGTCTGCCGAATACAATAGGGGACCTTATTCAATTAAGGTATCTTGGACTGAGGAAGACTAATTTGGAAGAGGAACTTCCACCTTCCATTGGAAACTTGCTGAACCTACAGACGCTTGATTTAAGGTACTGTTGTTTTCTGAAGAAGATACCAAATGTGATTTGGAAGATGATTAGTTTGAGGCATTTGCTTCTGTACACTCCATTTGATTCTCCAGATAGCCGTCATCTAAGATTGGATACATTAACCAATTTACAAAGCCTGCCGTACATTGAGGCTGGACACTGGATAGAAGATGGGGGTCTAGAAAACATGAAAAGTCTCAGGCAATTGGGAATATATGAATTATCCGGAAAAGTGGTGAGGTCAGTGCTTTCTATTGCACAAGGATTACCTCACCTTCACTCACTGTCTCTATCACTTCAATCAGAAGAAGATGAATTTCCAATTTTGATGCAGCTTTCTCAGTGCACTCATCTCCGCAAGCTCTCTTTGAATGGGAGGATCAAGAAGCTACCTGACCCTCATGAATTCCCGCCAAATCTTATCAAACTAACTCTGCATAACTCCCATTTACAGATGGAATCCATTGCCAAACTTGAGAGGCTGCCAAAACTGAAAATGCTTGTTTTAGGGAAAGCGGCGTACAACAGGAGGGAATTGATCTTCTCTGCTGATGGATTTTCACAATTGCGAATTCTAAGGCTTAATGTTCTGAAAGAATTGGAGGAGTGGACAGTTGAGGAAAGGGCAATACCAAGACTCGAGCATGTCATTATTAATCGCTGTGAGAAGCTGAAGAAGATCCCAGAAGGACTGAAGGCTCTCTCTTCTCTCAAGGAAATAAAGATTATAGGAATGCCAGTAGAATTTGAACAGAGACTACGAACTAAAGACTTGCTGGAATTCCAAAATATCCCTTCAATTGAATCAACTACAGACATTTTGGCAAATGATTTCAACGGCGGGCACAATGTTGGTCGTTGA 2784 0.435 MAEVAVSIVVEKLSELLVEQAVGAVGVVSVLDGLRNDVERLKNELRWMQCFLRDADAKQEENQLVRLWVSDIRDVAFEAEELIEIYVYKVACQSRWYRVFRSLHLYEVSRKIEKIRTRIHDVSTKRETYGVVRETQGKIITNDRLRYWRQPWPYTEEECVIELEDDMELLVNQLLTVDAGRVVSIVGMGGLGKTTLAKKLYNHSKIHNHFDCRAWVYVSKEYRRRDILLGILKDADARGRNEVDGRERWREEDMVTRLHTILDEKRYLVVLDDIWSTEVWDSLESAFPRGKMGSKILLTTRDMRIGKHAGGGGNPHKLRTLTEDESLRLLCHKAFPGMNSIPPELENLARDVVVKCGGLPLAVVVVGGLLSRKLQSNEEWMRVAKNISWHLLNEQDRIRYILALSYNDLPSHLKSCFLYLGLFPVGMNIQTKRLIRLWVAEGFLPQEGAETAEGVAENCLNELIGRCMVQVGSVSSLGKVKTIRIHDLLRDISVSKGEEEYFLRIYLGSLESSSASQLNRSRRHAIHSCYDRYDFLKHDACHSRSLLFFNREYNADIVKKIRFYDQQYNMNFLLEKKLNLIFSKFKLLRVLELDGVRAVRLPNTIGDLIQLRYLGLRKTNLEEELPPSIGNLLNLQTLDLRYCCFLKKIPNVIWKMISLRHLLLYTPFDSPDSRHLRLDTLTNLQSLPYIEAGHWIEDGGLENMKSLRQLGIYELSGKVVRSVLSIAQGLPHLHSLSLSLQSEEDEFPILMQLSQCTHLRKLSLNGRIKKLPDPHEFPPNLIKLTLHNSHLQMESIAKLERLPKLKMLVLGKAAYNRRELIFSADGFSQLRILRLNVLKELEEWTVEERAIPRLEHVIINRCEKLKKIPEGLKALSSLKEIKIIGMPVEFEQRLRTKDLLEFQNIPSIESTTDILANDFNGGHNVGR 927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3994g00003 927 FunFam Probable disease resistance protein At1g63360 406 495 - -
Pral3994g00003 927 Gene3D - 147 310 IPR027417 -
Pral3994g00003 927 FunFam Probable disease resistance protein At1g61300 148 312 - -
Pral3994g00003 927 Gene3D - 320 405 IPR042197 -
Pral3994g00003 927 CDD RX-CC_like 2 123 IPR038005 -
Pral3994g00003 927 Gene3D - 4 126 - -
Pral3994g00003 927 Gene3D Ribonuclease Inhibitor 555 917 IPR032675 -
Pral3994g00003 927 SUPERFAMILY L domain-like 485 912 - -
Pral3994g00003 927 Gene3D - 406 496 IPR036388 -
Pral3994g00003 927 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 420 IPR027417 -
Pral3994g00003 927 PRINTS Disease resistance protein signature 182 197 - -
Pral3994g00003 927 PRINTS Disease resistance protein signature 261 275 - -
Pral3994g00003 927 PRINTS Disease resistance protein signature 630 646 - -
Pral3994g00003 927 PRINTS Disease resistance protein signature 356 370 - -
Pral3994g00003 927 Pfam NB-ARC domain 164 407 IPR002182 GO:0043531
Pral3994g00003 927 PANTHER DISEASE RESISTANCE PROTEIN RP 31 862 IPR044974 GO:0006952
Pral3994g00003 927 Pfam Rx N-terminal domain 5 94 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3994g00003 Pral-Chr3994 25341 28796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3994g00003 181 492 WRKY Transcription Factor Family AT5G45050 24.214 4.05e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3994g00003 - - gmx:100788025 1283.86