Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3992g00004 ATGGCGCATCACAGGATGCTTTCTGTAAGGTTTGGAGAAGAAATCAAATCTTCTTCGAGAATGAAGCATGATGGGATTAGAAATGGCACTCTACGTGGTAACAAGAAGCAGGATCCAACATGGGAGGAAAAGCATATAACTCCTTCCAAAGGAAGAATCAACGAAATGTTTGCAGAGACAAGACTTTATGAGAGTCCCCAAGGGCATATTTCATTAACAGGTTCTGCAGGGTCGATTCAGTCTGGTCCTGTTTTCTTTTCGAATCGAACCCACAAGAGTATCCAGAGCACATCATCATTGTCGTCATCATTTAGATCTAGTAGAACTTCACTTTCCAGCTCCTCTGGAGGGAAAATAACGGAGAAGAAGAAAAAGGAGGAAAAAGGAGCATTGTTTTCTTGTATGGGACGAAAATCATGCAAGAACTCAAGAAGATCACCGGAACGTGCAAGAGTTAATGAAGCATTGATCATCGAGAGAGCGTGCGTGGTGGAGAGTCTGCCACAATTCTGGGCAGATAAGTACCGACCTGTTTCCCTGAATGACTTCGTTTGCCACAAACAAGAAGCTCAACTTCTCAAGCAATTTGTGTCTCTTGATGAAATTCCACACGCTCTGCTAAAAGGTCCCCCCGGTACGGGGAAAAGAGCCTTAGCAATGGCTCTTCTGCGAGAAATATACGGCGAGGAGTGTTGGAACGAAGGTAGGCCTACGAAAATAAGTGTTCCAATAACGTTCAGTCGTCATCACGTGGAACTAAACGTAAATTTGGAGCGGAATGCTAAGCATGCTTTGATTGGGTTAGTGAAGGAAATGAACTGTATCTATGCAGTAACACCCCAAGATGCCAATCTCAATATCAAGTCAGATTGTCAAGTGGTAGTTCTCTATGAGGTTGACAAGGCAGGACAGGACATCCAGCACATAATCTCATGGATTATAGATTGCCACTCCCAAATATGCAAACTAATACTCTGCTGCCAAGATGATGTTGACATTCCTGACTCTGTGAGGAACCTGCTCAAAGTGATTGAGGTTCGTCCACCTACTATTACTCAGATTGTAGAGATTCTGTTTGAGATAGCAAGGAAAGAGGATATTCATCTATCAATGAATTTTGCTGCTATGATTGCAGCAAAATCTAATCAGAATCTCAGGCAAGCTATCATGGCTCTTGAGGCATGCAAAGCATTCAAATATCCATTTTTGAAAGAACAGCCAATTTCAATTGGATGGGAGGATGTTGTAATAGAAATTGCTTCAGAGATCATAGCTGATCCATCAAATTCATGCCTAATCTCAGTAAGAGAAAAATTTCAGAAGCTTATGGAGGATTTTGTTCACCCAAAACTCATTCTCCAGAAACTAGTGGAAGAACTTTTGAAAAATATCGAAGCCAGCTTAAAAAGGGAACTCTACTATTGGCACGCTTATTATGACAAAAGACTCCCACCTGGAACTATAGCTTTAAACAAGTTAGCTGAATTTGTGGCCAAGTTTATGAGCATATACAGAAAGAGCTGTGTCAGCAGGCCATATATGTGA 1545 0.4162 MAHHRMLSVRFGEEIKSSSRMKHDGIRNGTLRGNKKQDPTWEEKHITPSKGRINEMFAETRLYESPQGHISLTGSAGSIQSGPVFFSNRTHKSIQSTSSLSSSFRSSRTSLSSSSGGKITEKKKKEEKGALFSCMGRKSCKNSRRSPERARVNEALIIERACVVESLPQFWADKYRPVSLNDFVCHKQEAQLLKQFVSLDEIPHALLKGPPGTGKRALAMALLREIYGEECWNEGRPTKISVPITFSRHHVELNVNLERNAKHALIGLVKEMNCIYAVTPQDANLNIKSDCQVVVLYEVDKAGQDIQHIISWIIDCHSQICKLILCCQDDVDIPDSVRNLLKVIEVRPPTITQIVEILFEIARKEDIHLSMNFAAMIAAKSNQNLRQAIMALEACKAFKYPFLKEQPISIGWEDVVIEIASEIIADPSNSCLISVREKFQKLMEDFVHPKLILQKLVEELLKNIEASLKRELYYWHAYYDKRLPPGTIALNKLAEFVAKFMSIYRKSCVSRPYM 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3992g00004 514 MobiDBLite consensus disorder prediction 19 44 - -
Pral3992g00004 514 MobiDBLite consensus disorder prediction 97 123 - -
Pral3992g00004 514 Gene3D - 411 504 - -
Pral3992g00004 514 MobiDBLite consensus disorder prediction 97 117 - -
Pral3992g00004 514 SUPERFAMILY post-AAA+ oligomerization domain-like 411 504 IPR008921 GO:0003677|GO:0006260
Pral3992g00004 514 Gene3D - 169 349 IPR027417 -
Pral3992g00004 514 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 165 396 IPR027417 -
Pral3992g00004 514 FunFam replication factor C subunit 3 350 408 - -
Pral3992g00004 514 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 168 497 - -
Pral3992g00004 514 Gene3D - 352 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3992g00004 Pral-Chr3992 14856 18110 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3992g00004 170 510 Core DNA Replication Machinery Family AT5G27740 36.338 6.96e-68 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3992g00004 K10756 - tcc:18610901 506.908