Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3989g00006 ATGGGAGATCCCTGGAGTATTGTTCCGTACAATGACCCGTACGATTTCCCATTGCCCGAAAGCATCCTCGATTTCCAGAATGATCATAATCTACCCCCCGCAGGTCCATCCAATGAGCACAATGCTTCTCCGTTCCCCCAACAAAGTGATGCAATTTTACAGGATACTTATCCGAATTCGGGTCATCAAGTGATTCAAGACGCCGCCATGCGGGATTTTCCCCATCAAGAGGGAAACTTTGAAGCAGGTCCATCTGGACTTCATGGGGAAAGCCATCCAAGTCAAGAGAATATGCATTCACAGAATTTCCCCGAGGTGTCTCAACTTCAATACTGGCCAGAAAATCCAGTCCCTTTTCTTTGTAGTTGCTGTCAAGTTCTTAGAGAAATCATTCACACTAATGGGATTAAGTTCTCAAAACTGGAGATTCACGGAAGACTGGGTGTGATCTCTCATGCAATTCTTCGACAGAATATTAGTGTGGGTTCCTCCGGCGATCAGCAAATTCACATGCTTGATTTTTGCAGAAAATCTATGGAGGATGTCAAGAATTTTCTTAGGCAGTACTGCGCGGAGAAGAATGCAGCAGGGTACTTCACTGTGCAAGATCCACTGTCAGCTTATTATGAAGCCCTCTGCATTGGAATGGAATGGAATGAAGATTTAAATGACGAATTCCTTGGCACCTACGCTGACAATTCTGGGGCAGCATCTGATGAGACCGAGGATATGGATAGGACTGCTCGGGCTAGTCTTTCAACGCAGAGGGAGAGAGCGGGGAAGATGAAACTGAGTGATTTCAGGGACGTGTTTCATCTACCTATTGAAGAAGCAGCGAGGCAAGTGAACTTGTGTCCTACGGTTGTGAAGAAGATATGCCGTAAAGAAGGATTAGCCAGATGGCCTCACAGAAAGATAAAGAGCATAGAGAGGAAAATAAACATATTGAGAGGGACTTTAAATTCAGCAGAGGCAGCGTCAAGGGCACAAACGGAGGCAGAAATTGAGAGACTTAAAGGAGAAATGATTGACCATTGTGGAGGAGTCATCCCAACTTCATTAAATTTCAATGCCTGA 1077 0.4503 MGDPWSIVPYNDPYDFPLPESILDFQNDHNLPPAGPSNEHNASPFPQQSDAILQDTYPNSGHQVIQDAAMRDFPHQEGNFEAGPSGLHGESHPSQENMHSQNFPEVSQLQYWPENPVPFLCSCCQVLREIIHTNGIKFSKLEIHGRLGVISHAILRQNISVGSSGDQQIHMLDFCRKSMEDVKNFLRQYCAEKNAAGYFTVQDPLSAYYEALCIGMEWNEDLNDEFLGTYADNSGAASDETEDMDRTARASLSTQRERAGKMKLSDFRDVFHLPIEEAARQVNLCPTVVKKICRKEGLARWPHRKIKSIERKINILRGTLNSAEAASRAQTEAEIERLKGEMIDHCGGVIPTSLNFNA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3989g00006 358 MobiDBLite consensus disorder prediction 31 46 - -
Pral3989g00006 358 Pfam RWP-RK domain 262 309 IPR003035 -
Pral3989g00006 358 Coils Coil 306 326 - -
Pral3989g00006 358 MobiDBLite consensus disorder prediction 75 100 - -
Pral3989g00006 358 ProSiteProfiles RWP-RK domain profile. 249 329 IPR003035 -
Pral3989g00006 358 MobiDBLite consensus disorder prediction 19 46 - -
Pral3989g00006 358 PANTHER PROTEIN RKD4 48 342 IPR044607 GO:0003700
Pral3989g00006 358 MobiDBLite consensus disorder prediction 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3989g00006 Pral-Chr3989 25518 27062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3989g00006 217 326 NLP Transcription Factor Family AT1G64530 29.204 2.18e-11 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pral3989g00006 RWP-RK 1.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3989g00006 - - pcin:129302128 576.244