Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3987g00019 ATGGGTATTGATTTTTCAAAGATCTCATCATGCTGCTCGAGCACAGAGATAAGGGGTCCATTGCCTGGGGCCAAAGTTGACGAAAATGAAAAGAAAAGTGACGCCCCTAATGTGCCATCATTTCAAGAGTACAAAATTCATCAGCTCAGCAAGGCTACTTCTGGATTTGCTACCGAAAATATAGTTTCCGAACAGGGGGAAAATGCTCCAAATATGGTTTATAGAGGAAAACTGGAGAATCAAACACTAATTGCTGTTAAACGGTTCAATAGACAAGCTTGGCCTGATGCCAAACAATTTACACAAGAAGCCAAGGCAATTAGTCGTCTAAGAAATGAAAGGTTGGTGAGCCTACTTGGATGCTGTGGTGATGGTGAAGAGAGGTTACTTGTTGCTGAATATATGCCCAATGATACTTTGGCCACACACTTGTTCCATTGGGAAACTGAGCCCATGAAATGGACAATGCGACTGAGGGTTGCTCTATATGTTGCCCAAGCCCTAGAATATTGTGCAAGCAAAGGACGTACGCTATATCATGATTTAAATGCTTATAGAGTCCTTTTTGATGATGAAGGAAATCCCAGAATCTCATGCTTTGGTTTGATGAAGAACAGTCGAGATGGTAAAAGTTATAGTTCAAACTTGGCATTTGCTCCACCTGAATATCTCAGGATAGGTAGAATTACTCCAGCAAGTGTCACATACAGTTTTGGAACCATTTTGCTGGACCTTCTCACTGGAAAGCATATTCCTCCTGGCCTTGCACTTGACCTGATTCGGGAGAGGAACCTTGATATGTTGAAAGATTCTTGTTTAGAAGGAGAGTTTTCAAGTGATGAAGGGATTGAATTTGTGCAGTTAGCAGCAGAATGTTTGCGAACAGAACCACAGGAGCGTCCTCATCCCAATTCATTGGTTACTGCTTTGATACCTATACAGAAGGATTCTGAGGTTCCTTCTTATGTTTTGATGGGTTTACCGCATGATGCTACCACTTCATCCCTTCCATCAATTGCTGAAGCTTGTCTGAGATTGGATTTGACAGCCTTCCATGCCTTCCTTGAGAATATGGGGTATAAAGATGATGAGGCTACTTCTACTGAGGTGTCATTGATATGGACCTACCAGATGTATGAAACATTGTACCCAAAAAAGAAGGGTGATGCTACTTTTCGCCATAAAGATTTTAGCACCGCGATTGATAGCTATACACAGTTCATTGATGCTGGAACCATGGTTTCTCCGACAGTTTATGCACGTCGCGGCCTGTGTTATCTGAAGAACAAAATGCCAGAGAAAGCACTGAACGATGCATTGCAAGCAATTAAAACTTCCCCTACTTGCTACATTGCATTTTACTTACAAGCTATGGCACTTGTTGCATTGGGCAAGGAGAATGAGGCTCAGGTGGCTCTTAAACAGGCTTCTTCACTTGAAAGTAAAACGTACATAAATTAG 1461 0.4189 MGIDFSKISSCCSSTEIRGPLPGAKVDENEKKSDAPNVPSFQEYKIHQLSKATSGFATENIVSEQGENAPNMVYRGKLENQTLIAVKRFNRQAWPDAKQFTQEAKAISRLRNERLVSLLGCCGDGEERLLVAEYMPNDTLATHLFHWETEPMKWTMRLRVALYVAQALEYCASKGRTLYHDLNAYRVLFDDEGNPRISCFGLMKNSRDGKSYSSNLAFAPPEYLRIGRITPASVTYSFGTILLDLLTGKHIPPGLALDLIRERNLDMLKDSCLEGEFSSDEGIEFVQLAAECLRTEPQERPHPNSLVTALIPIQKDSEVPSYVLMGLPHDATTSSLPSIAEACLRLDLTAFHAFLENMGYKDDEATSTEVSLIWTYQMYETLYPKKKGDATFRHKDFSTAIDSYTQFIDAGTMVSPTVYARRGLCYLKNKMPEKALNDALQAIKTSPTCYIAFYLQAMALVALGKENEAQVALKQASSLESKTYIN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3987g00019 486 MobiDBLite consensus disorder prediction 19 39 - -
Pral3987g00019 486 SUPERFAMILY TPR-like 385 482 IPR011990 GO:0005515
Pral3987g00019 486 Pfam Protein tyrosine and serine/threonine kinase 71 309 IPR001245 GO:0004672|GO:0006468
Pral3987g00019 486 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3987g00019 486 FunFam probable serine/threonine-protein kinase At5g41260 136 327 - -
Pral3987g00019 486 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 27 482 IPR045845 GO:0004672|GO:0009742
Pral3987g00019 486 SUPERFAMILY Protein kinase-like (PK-like) 37 320 IPR011009 -
Pral3987g00019 486 SMART tpr_5 450 483 IPR019734 GO:0005515
Pral3987g00019 486 SMART tpr_5 416 449 IPR019734 GO:0005515
Pral3987g00019 486 Gene3D Tetratricopeptide repeat domain 383 485 IPR011990 GO:0005515
Pral3987g00019 486 Pfam Tetratricopeptide repeat 418 449 IPR019734 GO:0005515
Pral3987g00019 486 FunFam probable serine/threonine-protein kinase At4g35230 31 134 - -
Pral3987g00019 486 Gene3D Phosphorylase Kinase; domain 1 29 134 - -
Pral3987g00019 486 Gene3D Transferase(Phosphotransferase) domain 1 136 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3987g00019 Pral-Chr3987 966132 974645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3987g00019 29 310 Glycoside Hydrolase AT3G07070 35.161 5.74e-43 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Pral3987g00019 PK_Tyr_Ser-Thr 2.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3987g00019 K14500 - gmx:100819210 689.108