Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3987g00001 ATGAGGTCATGGAGTTCATTGTTGTTTATCGGTTTGATTTCCACGGTCTCTTTCGTGGCCTGTGATAATGCTGTGGCCTCCAAAGAAGTTTTGGCGCTTAATGCTTTCAAAGAAGCTATTTATGAGGATCCATTTCAAGTTTTGTCCAATTGGAATTCGATGGATTCAGATCCTTGTGAGTGGAACGGCGTTTTCTGCAATCCGGCCCGAGATCATGTTATCAAGTTAAACATTTCGAGATCATCATTAAAGGGATTTCTAGCACCAGAATTGGGACGAATCACGTACTTGGAAGAGTTGATTTTGCACGGCAATAAACTGATTGGAACAATACCTAAAGAGCTAGGCGCGTTGAAATCTCTTAAGGTCTTGGATTTGGGGATGAATCGGTTATCAGGACCAATTCCTCCAGAGATTGGAAATTCAACCCAATTAATAAGAATAAACCTGCAGTCCAACGGGTTGACTGGTAGACTACCTCCAGATCTTGGAAATTTGAAATACCTTCAAGAACTGAGACTGGATAGGAATAAGCTTCAAGGGCCTGTCCCTGCTGATAGCAGTTCCGATTTTACTACCACTATGCGTGGAATGTATGCATCAAATGCGAATTTAACTGGTTTCTGTCGTTCGTCTCAGTTAAAGGTCGCTGATTTTTCCTATAACTTCTTTGTTGGTAGCATTCCAAAATGCTTGGGGTATCTTCCAAGGTCTAGCTTTCAAGGGAATTGCCTCAAGATCAAGGATTTAAAGCAACGCTCTTCTGTACAATGTGCTGGTGCTTCACCTGCCAGGGGTCATCCAGTGATCAACCCAAAGCACCGATCAGCTGATTATCTGTCCAAGCATCAAGGAGCATCAAAACCTACATGGCTTTTGGCTCTGGAAATAGTGACGGGAACCATGATTGGTTCTCTCTTTTTAGTTGCTCTTCTTACTGCTTTTCAGAGGTTGAACAACAAGTCGTCCATCATTATTCCCTGGAAGAAATCTGCAAGCGAGAAGGAGAATTTGACCTTATATATAGACTCTGAGATGTTGAAAGATGTACGGAAGTATAGCAGACAAGAGCTCGAAGTGGCTTGCGAAGATTTCAGCAACATCATTGGGTCCTCGCCTGACAGTGTGGTCTACAAGGGCACCGTTAAAGGTGGGCCTGAGATTGCCGTTATTTCCCTCTGTATTAAGGAGGAGAATTGGACAGGTTATCTGGAGCTTTATTTTCAGAGAGAGGTGGCAGACTTGACGAGGCTAAATCATGAGAATATAGGAAAACTACTAGGATATTGTAGAGAGAGCACTCCATTTACAAGGATGCTGGTTTTTGAATATGCTTCAAATGGGACACTTTCTGAGCACCTTCATTATGGAGAAGGATGCCAGCTATCATGGACAAGGCGTATGAATATTGTTATTGGCATTGCACGTGGTCTTAAATATCTACACGCAGAAGTTGAGCCTCCGTTTACTATATCGGATCTAAATTCTGGTGCTGTATACCTAACAGAAGATTTTGCCCCAAAGCTCGTTGATTTTGAAAGCTGGAAGACAATCTTGGAAAGATCAGAAAGGAATTCTGGTTCTGTTGGCAGCCAAGGTGCCGGGTGTGTTCTTCGAAATTCCATTGAAGCACGTCCACTTGATACCCTAGGGAACATATATGCTTTTGGGGTACTTCTACTGGAGATAGTCAGCGGAAGAACTCCCTATTACAAGGACAAGGGTTACTTGGTGGACTGGGCGAAGGGCTATCTCGAAAATCCTGAAGAAATGCCATCTTTGGTGGATCCCGAATTGAAGCATTTTAGAGATGAAGACCTGAAAGTAATATGTGAGGTAATAAATCTCTGTATCAATTCTGACCCTACAAGGCGTCCAGGGATGCAAGAGTTGTGTGGTATTCTGGAGAGCAGAATTGACACATCCATAACTTCGGAGCTCAAGGCATCGTCTTTGGCTTGGGCTGAACTTGCACTCTCATCTTGA 1986 0.432 MRSWSSLLFIGLISTVSFVACDNAVASKEVLALNAFKEAIYEDPFQVLSNWNSMDSDPCEWNGVFCNPARDHVIKLNISRSSLKGFLAPELGRITYLEELILHGNKLIGTIPKELGALKSLKVLDLGMNRLSGPIPPEIGNSTQLIRINLQSNGLTGRLPPDLGNLKYLQELRLDRNKLQGPVPADSSSDFTTTMRGMYASNANLTGFCRSSQLKVADFSYNFFVGSIPKCLGYLPRSSFQGNCLKIKDLKQRSSVQCAGASPARGHPVINPKHRSADYLSKHQGASKPTWLLALEIVTGTMIGSLFLVALLTAFQRLNNKSSIIIPWKKSASEKENLTLYIDSEMLKDVRKYSRQELEVACEDFSNIIGSSPDSVVYKGTVKGGPEIAVISLCIKEENWTGYLELYFQREVADLTRLNHENIGKLLGYCRESTPFTRMLVFEYASNGTLSEHLHYGEGCQLSWTRRMNIVIGIARGLKYLHAEVEPPFTISDLNSGAVYLTEDFAPKLVDFESWKTILERSERNSGSVGSQGAGCVLRNSIEARPLDTLGNIYAFGVLLLEIVSGRTPYYKDKGYLVDWAKGYLENPEEMPSLVDPELKHFRDEDLKVICEVINLCINSDPTRRPGMQELCGILESRIDTSITSELKASSLAWAELALSS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3987g00001 661 SUPERFAMILY Protein kinase-like (PK-like) 342 635 IPR011009 -
Pral3987g00001 661 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Pral3987g00001 661 Gene3D Ribonuclease Inhibitor 26 261 IPR032675 -
Pral3987g00001 661 FunFam Inactive receptor-like serine/threonine-protein kinase 337 444 - -
Pral3987g00001 661 Gene3D Phosphorylase Kinase; domain 1 338 444 - -
Pral3987g00001 661 Gene3D Transferase(Phosphotransferase) domain 1 445 651 - -
Pral3987g00001 661 SUPERFAMILY L domain-like 28 236 - -
Pral3987g00001 661 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 26 189 - -
Pral3987g00001 661 Pfam Protein tyrosine and serine/threonine kinase 367 632 IPR001245 GO:0004672|GO:0006468
Pral3987g00001 661 ProSiteProfiles Protein kinase domain profile. 363 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3987g00001 661 PANTHER PROTEIN MALE DISCOVERER 2 18 659 - -
Pral3987g00001 661 Pfam Leucine rich repeat N-terminal domain 27 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3987g00001 Pral-Chr3987 31284 40151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3987g00001 42 640 Receptor kinase-like Gene Family AT5G45780 28.736 4.88e-60 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Pral3987g00001 PK_Tyr_Ser-Thr 5.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3987g00001 - - pcin:129310704 1068.53