Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3981g00006 ATGGTTTTAAGAGGAACAGGAATTGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAGCACTTCCAGTCATGTGGGACAGTGAATAGGGTGACTATCCTTACAGACAAGTTTGGTCATCCAAAAGGTTTTGCTTATGTGGAATTCCTTGAACCTGAAGCTGTTCAAGAGGCTCTTGTCTTGAATGAATCTGAATTGCATGGTCGTCAATTGAAGGTCATGCCAAAAAGGACCAATGTCCCTGGAATGAAACAGTATCGCCCTAGGCGTTTTAATCCTTACATGGGGTATCGCTTCAGGAGGCCTTTCCCTCCTCCTTACTTTTACTCGCCTTATGGATACGGGAAGGTTCCCAGGTTCAGAAGGCCAAGTCGATACATGCCATATTATTAG 393 0.4453 MVLRGTGIVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEALVLNESELHGRQLKVMPKRTNVPGMKQYRPRRFNPYMGYRFRRPFPPPYFYSPYGYGKVPRFRRPSRYMPYY 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3981g00006 130 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 9 87 - -
Pral3981g00006 130 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 78 IPR000504 GO:0003723
Pral3981g00006 130 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 10 72 IPR000504 GO:0003723
Pral3981g00006 130 Gene3D - 7 82 IPR012677 -
Pral3981g00006 130 SUPERFAMILY RNA-binding domain, RBD 10 100 IPR035979 GO:0003676
Pral3981g00006 130 CDD RRM_II_PABPs 7 73 - -
Pral3981g00006 130 SMART rrm1_1 2 74 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3981g00006 Pral-Chr3981 37176 38969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3981g00006 9 98 Eukaryotic Initiation Factors Gene Family AT2G36660 30.000 9.69e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3981g00006 K14396 - fve:101314216 233.802