Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3981g00005 ATGCGTCAAAGGAGATGGCTTATGTTATGGTTCATCGGAAGAGCATTCTGCAACTGCTGGGATGCAATCTCTAGTCATAGAGCTCTGCTGCTGACTGCAAAGGTCTATGGTACCTTTGTTGTGTGCCATTTAGTTGACTTGCCAAGGGTATGCAGTTGCTGCTTCCCTGTGGCCTACATCGCAGTCATTTCACCTCTGTGGATAAGATTATCTGATATTTTTCAAATGAGGCAGTTTGTCCCTCATTTCGTGTTATTGTGCCCAGCATTGAGTTCTTATTATGCTTTGGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAGCACTTCCAGTCATGTGGGACAGTGAATAGGGTGACTATCCTTACAGACAAGTTTGGTCATCCAAAAGGTTTTGCTTATGTGGAATTCCTTGAACCTGAAGCTGTTCAAGAGGCTCTTGTCTTGAATGAATCTGAATTGCATGGTCGTCAATTGAAGGTCATGCCAAAAAGGACCAATGTCCCTGGAATGAAACAGTATCGCCCTAGGCGTTTTAATCCTTACATGGGGTATCGCTTCAGGAGGCCTTTCCCTCCTCCTTACTTTTACTCGCCTTATGGATACGGGAAGGTTCCCAGGTTCAGAAGGCCAAGTCGATACATGCCATATTATTAG 657 0.4475 MRQRRWLMLWFIGRAFCNCWDAISSHRALLLTAKVYGTFVVCHLVDLPRVCSCCFPVAYIAVISPLWIRLSDIFQMRQFVPHFVLLCPALSSYYALVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEALVLNESELHGRQLKVMPKRTNVPGMKQYRPRRFNPYMGYRFRRPFPPPYFYSPYGYGKVPRFRRPSRYMPYY 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3981g00005 218 Gene3D - 93 170 IPR012677 -
Pral3981g00005 218 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 98 160 IPR000504 GO:0003723
Pral3981g00005 218 SMART rrm1_1 97 162 IPR000504 GO:0003723
Pral3981g00005 218 CDD RRM_II_PABPs 91 161 - -
Pral3981g00005 218 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 90 166 IPR000504 GO:0003723
Pral3981g00005 218 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 97 174 - -
Pral3981g00005 218 SUPERFAMILY RNA-binding domain, RBD 98 188 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3981g00005 Pral-Chr3981 37176 39701 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3981g00005 85 186 Eukaryotic Initiation Factors Gene Family AT2G36660 27.451 9.67e-08 50.1