Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3981g00004 ATGCGTCAAAGGAGATGGCTTATGTTATGGTTCATCGGAAGAGCATTCTGCAACTGCTGGGATGCAATCTCTAGTCATAGAGCTCTGCTGCTGACTGCAAAGGTCTATGGTACCTTTGTTGTGTGCCATTTAGTTGACTTGCCAAGGGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAGCACTTCCAGTCATGTGGGACAGTGAATAGGGTGACTATCCTTACAGACAAGTTTGGTCATCCAAAAGGTTTTGCTTATGTGGAATTCCTTGAACCTGAAGCTGTTCAAGAGGCTCTTGTCTTGAATGAATCTGAATTGCATGGTCGTCAATTGAAGGTCATGCCAAAAAGGACCAATGTCCCTGGAATGAAACAGTATCGCCCTAGGCGTTTTAATCCTTACATGGGGTATCGCTTCAGGAGGCCTTTCCCTCCTCCTTACTTTTACTCGCCTTATGGATACGGGAAGGTTCCCAGGTTCAGAAGGCCAAGTCGATACATGCCATATTATTAG 516 0.4554 MRQRRWLMLWFIGRAFCNCWDAISSHRALLLTAKVYGTFVVCHLVDLPRVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEALVLNESELHGRQLKVMPKRTNVPGMKQYRPRRFNPYMGYRFRRPFPPPYFYSPYGYGKVPRFRRPSRYMPYY 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3981g00004 171 SUPERFAMILY RNA-binding domain, RBD 50 141 IPR035979 GO:0003676
Pral3981g00004 171 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 119 IPR000504 GO:0003723
Pral3981g00004 171 CDD RRM_II_PABPs 50 114 - -
Pral3981g00004 171 Gene3D - 45 123 IPR012677 -
Pral3981g00004 171 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 50 127 - -
Pral3981g00004 171 SMART rrm1_1 41 115 IPR000504 GO:0003723
Pral3981g00004 171 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 113 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3981g00004 Pral-Chr3981 37176 39701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3981g00004 26 139 Eukaryotic Initiation Factors Gene Family AT2G36660 28.070 1.16e-08 51.6