Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3981g00003 ATGCGTCAAAGGAGATGGCTTATGTTATGGTTCATCGGAAGAGCATTCTGCAACTGCTGGGATGCAATCTCTAGTCATAGAGCTCTGCTGCTGACTGCAAAGGTTGATTATGCATGCACACCAGAAGAAGTGCAGCAGCACTTCCAGTCATGTGGGACAGTGAATAGGGTGACTATCCTTACAGACAAGTTTGGTCATCCAAAAGGTTTTGCTTATGTGGAATTCCTTGAACCTGAAGCTGTTCAAGAGGCTCTTGTCTTGAATGAATCTGAATTGCATGGTCGTCAATTGAAGGTCATGCCAAAAAGGACCAATGTCCCTGGAATGAAACAGTATCGCCCTAGGCGTTTTAATCCTTACATGGGGTATCGCTTCAGGAGGCCTTTCCCTCCTCCTTACTTTTACTCGCCTTATGGATACGGGAAGGTTCCCAGGTTCAGAAGGCCAAGTCGATACATGCCATATTATTAG 471 0.4565 MRQRRWLMLWFIGRAFCNCWDAISSHRALLLTAKVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEALVLNESELHGRQLKVMPKRTNVPGMKQYRPRRFNPYMGYRFRRPFPPPYFYSPYGYGKVPRFRRPSRYMPYY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3981g00003 156 SUPERFAMILY RNA-binding domain, RBD 35 126 IPR035979 GO:0003676
Pral3981g00003 156 SMART rrm1_1 29 100 IPR000504 GO:0003723
Pral3981g00003 156 Gene3D - 27 108 IPR012677 -
Pral3981g00003 156 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 35 112 - -
Pral3981g00003 156 CDD RRM_II_PABPs 35 99 - -
Pral3981g00003 156 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 104 IPR000504 GO:0003723
Pral3981g00003 156 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 36 98 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3981g00003 Pral-Chr3981 37176 39701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3981g00003 35 124 Eukaryotic Initiation Factors Gene Family AT2G36660 30.000 1.85e-08 50.4