Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3980g00025 ATGGCTGGTTCTTCAAGAGCTGCCTCGGTTTCCCTTTACATCGCATTCCTTCTCTTCGGCTTCTCTGCGGCTAAGGAAGTCTTGATCGGAGGCAAGAACGATGCGTGGAAGATACCATCCTCTGAATCAGACTCCCTCAACAAATGGGCCGAAAGATCTCGTTTCCAAGTCGGCGATTATCTCGTCTGGAAATATGATGGTGGGAAAGACTCGGTCTTGCAAGTGAGCAGGGAAGATTATGGTGACTGCAGCACCGCCAATCCCATCAAGGAGTACAATGACGGAAACACCAAGGTGAAGCTCGACCGCCCTGGGCCATTCTACTTCATTAGCGGGGCTAAGGGACACTGTGAGGAGGGCCAGAAGCTCATTGTGGTGGTTATCACTCCCAAGCGTAGGTTTACTGGTATTTCTCCGGCACTTGCCCCGGCTCCAGCCCCGACGGATTTTGAAGGCCCAGCTGTAGCTCCCACTAGCAGCGCCTCAGCTTTAAAAGGTGGCCTCGCGGCAGTTCTGGGATTACTGACCATTTGGGCTTTCTGA 543 0.5304 MAGSSRAASVSLYIAFLLFGFSAAKEVLIGGKNDAWKIPSSESDSLNKWAERSRFQVGDYLVWKYDGGKDSVLQVSREDYGDCSTANPIKEYNDGNTKVKLDRPGPFYFISGAKGHCEEGQKLIVVVITPKRRFTGISPALAPAPAPTDFEGPAVAPTSSASALKGGLAAVLGLLTIWAF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3980g00025 180 FunFam Early nodulin-like protein 1 24 132 - -
Pral3980g00025 180 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Pral3980g00025 180 Gene3D - 23 131 IPR008972 -
Pral3980g00025 180 CDD OsENODL1_like 25 128 IPR041846 -
Pral3980g00025 180 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Pral3980g00025 180 PANTHER BLUE COPPER PROTEIN 29 143 IPR039391 GO:0009055
Pral3980g00025 180 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3980g00025 Pral-Chr3980 68874 69828 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3980g00025 1 180 Phytocyanin Superfamily AT4G31840 53.591 3.83e-67 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3980g00025 - - gmx:100305551 256.529