Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3980g00018 ATGGGAATATATCTAAGCAGTCCCAAAACTGAGAAGTTTTCTGAAGATGGTGAGAATGACCGTCTTAGATATGGTTTGTCATCCATGCAAGGTTGGCGTGCAACAATGGAAGATGCTCATGCTGCATGTCCAGATCTTGATGCATCCACTTCGTTTTTTGGTGTTTATGATGGGCATGGAGGAAAGGTCGTTGCAAAGTTTTGTGCTAAATATCTTCACCAACAGGTGGTCAAAAGTGAAGCATATACAGCTGGAGATATAGGAACAGCTCTTCAGAAAGCTTTTTTCAGAATGGATGAGATGATGCGTGGTCAAAGAGGATGGAGGGAATTAGCCGTCTTAGGTGATAAGATAAACAAGTTTACTGGGATGATAGAAGGATTGATCTGGTCACCACGAAGCAGCGATGGTAATGACCAGGTTGATGATTGGGCTTTTGAAGAGGGACCACATTCTGATTTTGCTGGACCTACTTCAGGAAGCACTGCCTGTGTTGCAGTAATAAGAAACAACCTGCTTGTTGTTGCAAATGCTGGGGATTCAAGATGTGTGATATCCAGGAAGGGTCAGGCGTACAATTTATCTAGGGACCACAAGCCTGATCTTGAGATTGAGAAGGAAAGAATCTTAAAAGCTGGTGGTTTTATTCATGCAGGGCGAGTTAATGGAAGTTTAAATCTTGCAAGAGCTATAGGTGACATGGAATTTAAACAAAATAAGTTTCTGCCTGCTGATAAACAAATTGTGACTGCCAATCCTGACATAAACACTGTGGAGCTTTGTGATGAAGACGAGTTTTTAGTGCTAGCATGTGATGGAATATGGGATTGCTTATCAAGCCAGCAATTGGTAGATTATGTGCATGAACAACTTCTGTCGGAAACGAAACTCTCAACCGTATGTGAGAGAGTACTTGATCGGTGTTTGGCCCCATCAACTGTTGGAGGTGAGGGATGTGATAACATGACAATGATCTTGTTACAATTCAAGAAACCCACCCGGTCTACTGAAGTGGCGGCAGAGCAATCCACTTCAAACGAACAAGCTGAATCTGAACCAAAACCAGAGGGAAGCAAAATTTAA 1083 0.4238 MGIYLSSPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAACPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVVKSEAYTAGDIGTALQKAFFRMDEMMRGQRGWRELAVLGDKINKFTGMIEGLIWSPRSSDGNDQVDDWAFEEGPHSDFAGPTSGSTACVAVIRNNLLVVANAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPADKQIVTANPDINTVELCDEDEFLVLACDGIWDCLSSQQLVDYVHEQLLSETKLSTVCERVLDRCLAPSTVGGEGCDNMTMILLQFKKPTRSTEVAAEQSTSNEQAESEPKPEGSKI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3980g00018 360 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Pral3980g00018 360 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Pral3980g00018 360 PANTHER PROTEIN PHOSPHATASE 2C 17 327 IPR015655 GO:0004722|GO:0006470
Pral3980g00018 360 CDD PP2Cc 23 329 IPR001932 -
Pral3980g00018 360 SMART PP2C_4 13 327 IPR001932 -
Pral3980g00018 360 MobiDBLite consensus disorder prediction 336 360 - -
Pral3980g00018 360 Gene3D - 1 330 IPR036457 -
Pral3980g00018 360 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Pral3980g00018 360 Pfam Protein phosphatase 2C 153 313 IPR001932 -
Pral3980g00018 360 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Pral3980g00018 360 MobiDBLite consensus disorder prediction 336 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3980g00018 Pral-Chr3980 42346 48458 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3980g00018 1 335 PP2C-type Phosphatase Gene Family AT2G25070 80.000 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3980g00018 K17499 - zju:107419763 654.055