Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3978g00023 ATGATGCACATGACCTTCTATTGGAGCAAAAAAGTGACCCTCCTCTTCGACTTCTGGAAAACCGATTCATGGACGAGTTACTCATTGAGTTTGCTCGCGTGTCTCCTGGTCTCTGCTTTCTACCAGTACCTGGAGAATCGCCGCCTTCGCCTGAAGGCTATTACATTTGAGACGCCTTCTTCTACGACGCCCCAGAATCAGATCCCACTCCTCCGACAGAATCTCACCGGTGACAAGGCCAAATTAGGGGTGAGGTTCGCCGGAGCGTTGCTGTTTGGGTTTAATTCGGTGGTCGGATATCTGCTGATGCTGGCCGTCATGTCCTTTAACGGAGGAGTCCTTGTGGCGATCGTGGTCGGTCTTGCTATCGGCTACTTCTTTTTCAGGTCTGAGGGTGACGAAGGAACTGTTCTAGTCGCTGACAGCGCCTGTGCATGTGCTTAG 444 0.518 MMHMTFYWSKKVTLLFDFWKTDSWTSYSLSLLACLLVSAFYQYLENRRLRLKAITFETPSSTTPQNQIPLLRQNLTGDKAKLGVRFAGALLFGFNSVVGYLLMLAVMSFNGGVLVAIVVGLAIGYFFFRSEGDEGTVLVADSACACA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3978g00023 147 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 132 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pral3978g00023 147 Pfam Ctr copper transporter family 4 128 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3978g00023 Pral-Chr3978 144125 145013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3978g00023 1 147 Inorganic Solute Cotransporters AT5G20650 53.642 1.06e-51 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3978g00023 K14686 - gmx:100801036 194.512