Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3978g00007 ATGGCGACCTCTTTTGCTTTTCTGGTTCTCTTTGTTATGATGAAACTTGTCCATATTTCCTGGTGGACACCCAAAAGTATTGAGAGAATATTAAGGAAACAAGGGATGAGGGGCACTTCATACCGTCCCTTCAGAGGGGACAAGCCAGAAATGGAGAAGTCTGTGAAAGACTCATCTTCTAAACCCATCGCCCTCAACGCCCAAGTCGTCCCTCGAGTCATCCCTTTCTATCACGACATGGTGAAGCGATATGGAAAAGTTTCCGTATGTTGGTCAGGGAGTATTCCAAGGTTGATAATAGGGGAGGCAGAGTTGATAAGGTTGATATTTGACGATAAGAAAGGCGGCATAACGCAGCAACCTCTTAACCCATTAGTGAAACTCCTCCACAAAGGTTTAGCAACCTTGGGAGGTGAAAAATGGAGTAAACGCAGAAGACAGATAACTCCTGCTTTCCACCTTGACAAGTTGAAGGGAATGGTTCCGGCATTTTCAAGCAGCTGTTATGACCTGATCGAGCGGTGGCAGAAAAAAGTAGAAGCACAAGGGTGGTGTGAAATTGACGTTGCTCCAGAACTCGATGCTTTGGCCTGTGATGCCATATCTCGAACAGCCTTTGGATGTAACTACCAAGAGGGAAAGCAGTTATTTGAACTCCAGAAAGAACAAGTGTCGCTGGCACATGAAGCCTATCAATCAATCTATGTCCCAGGCTTGAGGTTCGTACCCACAAGGAAGAACAAGAGGAGGTACCAATTATACGACCAAATCAAAGGATTATTGAGGAACATGATACGGCAAAGAGAAGATGCAACGAAAAGAGGAGAATTGGGAAGAGGCCTTGATTTATTGGGATTACTATTGCAGTGCAAAGAACAAAGCAAAAATAATGATCTGACAATTGAAGACGTGATGGAAGAATGCAAATTGTTCTACTTCGCTGGTCAAGAGACCACCGCCACCCTCCTCACATGGACTATGATCTGCTTATCTATGTACCCAGATTGGCAAGAGAAGGCCAGACAAGAAGTATTAGAGATCTGCGGCACAACAAAGCCTAATTCCGGAACCATTAGTCGCCTTAAGATTGTATCAATGATTCTTCATGAAGTGCTGAGACTGTATCCTCCTGTACCTATTTTGTTCAGATACACAAGACGCGAAACCAATGTGGGAAGGTTGTTGATACCAGCAGGGGCTGAGCTTTGCTTATCGGTGATGCATGCTCATTATGATACCAATTACTGGGGTGAGGATGCAGACCAGTTCAAGCCAGAGAGATTCTCTAAAGGAGTTTCAAAAGCCTCAAAGGATCAAGTGGCTTTTTATGCATTTGGTTGGGGTCCAAGAATATGCCTGGGCCAAGCCTTTGCTTTGATTGAAGCAAAGATAACTGTCGCTACAATTCTTCAACATTTCTCATTTCACCTCTCGCCGTCTTACGCTCATGCGCCTCACCTTGGCATTAATATAAAGCCCCAGTATGGTGCTCCTATCATTCTGCGTCGTATCTAA 1515 0.4449 MATSFAFLVLFVMMKLVHISWWTPKSIERILRKQGMRGTSYRPFRGDKPEMEKSVKDSSSKPIALNAQVVPRVIPFYHDMVKRYGKVSVCWSGSIPRLIIGEAELIRLIFDDKKGGITQQPLNPLVKLLHKGLATLGGEKWSKRRRQITPAFHLDKLKGMVPAFSSSCYDLIERWQKKVEAQGWCEIDVAPELDALACDAISRTAFGCNYQEGKQLFELQKEQVSLAHEAYQSIYVPGLRFVPTRKNKRRYQLYDQIKGLLRNMIRQREDATKRGELGRGLDLLGLLLQCKEQSKNNDLTIEDVMEECKLFYFAGQETTATLLTWTMICLSMYPDWQEKARQEVLEICGTTKPNSGTISRLKIVSMILHEVLRLYPPVPILFRYTRRETNVGRLLIPAGAELCLSVMHAHYDTNYWGEDADQFKPERFSKGVSKASKDQVAFYAFGWGPRICLGQAFALIEAKITVATILQHFSFHLSPSYAHAPHLGINIKPQYGAPIILRRI 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3978g00007 504 Pfam Cytochrome P450 76 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS E-class P450 group I signature 81 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 PANTHER CYTOCHROME P450 FAMILY MEMBER 12 497 - -
Pral3978g00007 504 SUPERFAMILY Cytochrome P450 71 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3978g00007 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Pral3978g00007 504 Gene3D Cytochrome P450 59 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3978g00007 Pral-Chr3978 46219 48217 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3978g00007 21 504 Cytochrome P450 AT3G14680 46.296 6.44e-162 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3978g00007 - - cave:132185761 637.491