Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3976g00040 ATGAGCACGAATTTCAGAGACAGCCCTGAAATTATGCAGAGTTTAACATCCCCTCGACTGTCCCGGCAATCATCCAAAGCGAGTAGCAAGCATAAGAACCTAGCGGAGGCAGCAAGCCCCGTTCATAGTGGATGCTGCCGAGGTTTCGGTAATGTCAAGACCACGGGACCAACTTTGTCAACCTTGCAATACCAGCAGCAGCTCAACCATTCCAAGAGATTGGAAGGAAAGGTGGCGGATTTGGAGAAAGAAGTGCAGAGGCAGACAGAGCTGCGAGTCATGTATAGGAAAAGGATGGAAAGAACGCAGGACTATCTGAGATACTGCCTCCAAATAGCACAAGAGAACGGCATATTGGACCTCATCACCCACTCCAAAGCCGACCTCCAACAGTCCCCTTTATCGCTCCACACGGTCAACTCCACCGCTAGTCCTCAGATTCGCTCTCCCGTCCGCCGCCGCCAGCACCACCCAGATCTTGCAGCCATCATCGATCAAGCCAAAATCCATGGGTGGTATATTGATCCTCTTGAGATTCAAATGGAGGAGAAGATAGGACAGGGAACCACGGCAGAGATATATAGGGCAACTTGGAGAGGATATGACGTGGCGGTGAAGTGCTTATCTGCGGAGTTTTTCAGAACAAACGCTCACGGGGTCGTATTTTTCGCTCAAGAGGTAGATACTCTGTCGAGGCAGAGGCACCGGTTTGTGCTTCAGCTGATGGGGGCATGCCTGGACCCTCCCCACCACGCCTGGATGGTGACGGAGCATGTGAGGACCACCCTCAAAGACTGGCTTCACGGCCCCGGCAAGAGACGCAGAGACAGGCAAGTCCCACTTCCTTCCCTCAAAGACAGAGTCATGAGGGCTCTGGAGATCGCTCAGGCCATGCAGTATCTGCATGAACAAAAGCCCAAGGTCATCCACCGTGACCTCAAACCCAGCAACATTTTCTTGGACGACGCCCTCCACGTCAGAATCGCCGATTTCGGCCATGCGCGCTTCTTGGCTGACCAAGAAATGGCCCTCACCGGCGAAACAGGGACGTACGTGTACATGGCACCGGAGGTGATTCGATGCGAGCCTTATAATGAAAAGTGCGACGTATACAGTTTTGGGGTGATACTAAACGAGCTTCTAACCGGAAACTACCCTTATATTGAGACAGACTACAGTCCGACCAAGATCGCAGTGGAAGTGGTGGAGGGGAAGCTGAGGCCGATGGTTGCGGAGGATAGAGAAGGAGAAGTGGAGGAACTGGTTCAAGTGATCAGACTCTGTTGGGATGGAAATCCAACCATGAGACCCTCATTTGCAACCATCGCCACTGCTCTCAAAGCCTACATCAAGGAGGCCTCTTTCAAGTGGCTCATTAGCTAA 1383 0.5235 MSTNFRDSPEIMQSLTSPRLSRQSSKASSKHKNLAEAASPVHSGCCRGFGNVKTTGPTLSTLQYQQQLNHSKRLEGKVADLEKEVQRQTELRVMYRKRMERTQDYLRYCLQIAQENGILDLITHSKADLQQSPLSLHTVNSTASPQIRSPVRRRQHHPDLAAIIDQAKIHGWYIDPLEIQMEEKIGQGTTAEIYRATWRGYDVAVKCLSAEFFRTNAHGVVFFAQEVDTLSRQRHRFVLQLMGACLDPPHHAWMVTEHVRTTLKDWLHGPGKRRRDRQVPLPSLKDRVMRALEIAQAMQYLHEQKPKVIHRDLKPSNIFLDDALHVRIADFGHARFLADQEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGVILNELLTGNYPYIETDYSPTKIAVEVVEGKLRPMVAEDREGEVEELVQVIRLCWDGNPTMRPSFATIATALKAYIKEASFKWLIS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3976g00040 460 SMART serkin_6 179 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3976g00040 460 CDD STKc_MAP3K-like 185 446 - -
Pral3976g00040 460 Gene3D Phosphorylase Kinase; domain 1 167 260 - -
Pral3976g00040 460 SUPERFAMILY Protein kinase-like (PK-like) 163 443 IPR011009 -
Pral3976g00040 460 Gene3D Transferase(Phosphotransferase) domain 1 261 454 - -
Pral3976g00040 460 Pfam Protein kinase domain 181 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3976g00040 460 Coils Coil 64 98 - -
Pral3976g00040 460 MobiDBLite consensus disorder prediction 1 37 - -
Pral3976g00040 460 MobiDBLite consensus disorder prediction 1 32 - -
Pral3976g00040 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Pral3976g00040 460 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 70 448 - -
Pral3976g00040 460 ProSiteProfiles Protein kinase domain profile. 179 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3976g00040 460 ProSitePatterns Protein kinases ATP-binding region signature. 185 206 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3976g00040 Pral-Chr3976 214904 216845 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3976g00040 172 454 MAP Kinase Kinase Kinase AT4G35780 35.336 2.02e-51 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Pral3976g00040 Pkinase 8.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3976g00040 - - pcin:129302127 810.831