Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3976g00035 ATGAGTTTAGGTGCAGCTGAGGACGATTCGGCTTCGGAAATTCATATCCCAGCAGAAATAGACTGGCACATGCTTGACAAATCCAAATTCTTCTTCTTAGGCGCCGCCTTATTTTCTGGTGTATCTACCGCCCTTTATCCTATTATTGTGTTAAAGACCCGCCAGCAGGTTTGTTCTTCTCAGATTTCTTGCTTCCAGATGTCTTTTTCCATCATGCGCTATGAAGGCTTTAGAGGGTTTTACAAAGGTTTTGGTACCTCTTTGACTGGAACAATCCCTGCTCGGGCACTTTACATGGGTGCACTTGAGGTGACCAAGAGCAATGTTGGCTCTGCTATTGCTGGTTTGGGGTTTTCAGATACCACCGCCACCGCCATAGGTAATGCAGCTGCAGGAGTGAGCTCTGCTATGGCAGCACAATTAGTTTGGACCCCAATTGATGTTGTGAGTCAAAGACTCATGGTTTGCGGTAGCAGTAACGTGCTCTCCAGTGTTCATTGTGGGAATTACAGGAATGGTTTTGATGCCTTCAGGAAAATTCTTTGCACCGATGGGCTGCGAGGTTTGTATAGGGGATTCGGAATTTCCATATTGACTTATGCCCCGTCCAATGCTGTATGGTGGACTTCTTACTCTATGGTCCATAGGCTCATCTGGGGTACTTTTGGTGGCTATATGGGTAAGAAGGATGATAGCAAATTGGCCAATGGCTATTGTTTTAGACCTGATTCCAAGGCTATGGTTGCAGTCCAAGGGTTAAGTGCAGTTGTGGCCAGTGGGGTTTCGGCCATTATAACTATGCCACTTGACACTATCAAGACAAGGTTGCAGGTTTTGGATGCAGAGGAGAATGGACGAAGGAAGCCATTAACTGCTATGCAGACTGTTAGGAATCTGGTGAAGGAAGGAGGCTTTATTGCTTGTTACAGAGGATTGGGACCAAGGTGGGCTTCAATGTCCGTGTCTGCTACAACCATGATTACTACCTACGAGTTTTTGAAACGAATGTCTACCAAGAGGCTAGACAATGTATCTGCATAA 1041 0.4582 MSLGAAEDDSASEIHIPAEIDWHMLDKSKFFFLGAALFSGVSTALYPIIVLKTRQQVCSSQISCFQMSFSIMRYEGFRGFYKGFGTSLTGTIPARALYMGALEVTKSNVGSAIAGLGFSDTTATAIGNAAAGVSSAMAAQLVWTPIDVVSQRLMVCGSSNVLSSVHCGNYRNGFDAFRKILCTDGLRGLYRGFGISILTYAPSNAVWWTSYSMVHRLIWGTFGGYMGKKDDSKLANGYCFRPDSKAMVAVQGLSAVVASGVSAIITMPLDTIKTRLQVLDAEENGRRKPLTAMQTVRNLVKEGGFIACYRGLGPRWASMSVSATTMITTYEFLKRMSTKRLDNVSA 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3976g00035 346 SUPERFAMILY Mitochondrial carrier 23 333 IPR023395 -
Pral3976g00035 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 26 108 IPR018108 -
Pral3976g00035 346 Pfam Mitochondrial carrier protein 124 219 IPR018108 -
Pral3976g00035 346 Pfam Mitochondrial carrier protein 249 339 IPR018108 -
Pral3976g00035 346 Pfam Mitochondrial carrier protein 36 108 IPR018108 -
Pral3976g00035 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 336 IPR018108 -
Pral3976g00035 346 Gene3D Mitochondrial carrier domain 29 344 IPR023395 -
Pral3976g00035 346 PRINTS Mitochondrial carrier protein signature 190 208 IPR002067 GO:0055085
Pral3976g00035 346 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085
Pral3976g00035 346 PRINTS Mitochondrial carrier protein signature 255 277 IPR002067 GO:0055085
Pral3976g00035 346 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 10 340 - -
Pral3976g00035 346 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 217 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3976g00035 Pral-Chr3976 187570 189239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3976g00035 1 342 Chloroplast and Mitochondria Gene Families AT1G72820 67.826 1.08e-168 472
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3976g00035 K15121 - qsa:O6P43_015862 556.984