Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3976g00014 ATGGGTGCTTCTGGAAAATGGGTGAGATCTTTAATCGGGCTCAGGAAGTCTGATAAGGATGACCATGCCAAGGAGGGTGGAGGCAAGAGCAAGAAGTGGAGGCTATGGAGGAGTTCTTCTGGGGACATGACTTCCTGGAAAGGTTTCAAAGGAAACCACAGAGCTGCCTCCGAGGGTTCTGATTCTCCGGTTGCTGATGCTTTTACAGCTGCAAAGGCCACCGTGATTCGAGCTCCCCCTAAGGATTTCAGACTTGTTAGGCAAGAGTGGGCAGCAATAAGAATTCAAACTGCCTTTCGCGGTTTCTTGGCAAGAAGGGCCTTAAGGGCCTTGAAAGGAGTGGTAAGGCTTCAAGCTCTTGTGAGAGGTCGACAAGTAAGGAAGCAGGCTGCAGTGACGTTGAGGTGCATGCAGGCTCTGGTTCGCGTTCAAGCCCGAGTGAGGGCTCGTCGTGTTCGAATGTCCATAGAGGGGCAGGCTGTGCAAATGATGCTTAATGAACGTCGCACTAAGGCTGATCTCTTGAAAGAAGCTGAGGAGGGATGGTGTGATAGCAAAGGAACTCTGGAAGATGTCAAAGCTAAGCTACAGATGAGGCAGGAAGGAGCCTTCAAGAGAGAGAGAGCAATTGCATATTCTCTTGCTCAGAAGCAATGGAGATCAACCCCTTGTTCAAATGCACGAATAAATACCGCTCTCAAGAACTTTGAGATCGACAAGGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCCAAGCCCTGGGAAACTAGATTGATGGAACAGTCCCAGGCCGAGGCCTCTGATAAAAGTAAAACCCCACCTCCTAAGAAGTTTGTTGATTCCTTGGCAAACTCAAATTCAAAACCTTCGGAACAAGGCTTAGTCAAAGTCAGAAAGAACAACGTCAGCACGAGGATCTCAGCTAGGCCTCCCATTGCTGGGCAAACAACGCGTTCATCCTCAAGTCCAAGTTCTGAATTTCGATATGATGAGAGCTCTGCTTCGTCTTCCATTTGCACTTCCACAACACCAATATCTGGGAATACTGGGTTGGCCTCTGAAAGGACAGAGGACGGCACCGTGAGTCGGCCGAGTTACATGAACCTCACCGAGTCAACCAAGGCAAAGCAAAAGGCAGGCAATGTTGGGTGTCACAGAAGTCAAAGGCAGCAATCGATGGACGAGTTTCAGTTCCTGAAAAAGTCAGGGATTTTCTCAAATGGGGATTCCAAAAGCACTGCAGGTTCGGGCTCTGACCCTTCAATCAACTTCTCAAGGCCATTTTACCTACCCACCCACTTGGACAAGTGCTCAACGAAGGCGCGGTGA 1338 0.4955 MGASGKWVRSLIGLRKSDKDDHAKEGGGKSKKWRLWRSSSGDMTSWKGFKGNHRAASEGSDSPVADAFTAAKATVIRAPPKDFRLVRQEWAAIRIQTAFRGFLARRALRALKGVVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSIEGQAVQMMLNERRTKADLLKEAEEGWCDSKGTLEDVKAKLQMRQEGAFKRERAIAYSLAQKQWRSTPCSNARINTALKNFEIDKANWGWSWLERWMAAKPWETRLMEQSQAEASDKSKTPPPKKFVDSLANSNSKPSEQGLVKVRKNNVSTRISARPPIAGQTTRSSSSPSSEFRYDESSASSSICTSTTPISGNTGLASERTEDGTVSRPSYMNLTESTKAKQKAGNVGCHRSQRQQSMDEFQFLKKSGIFSNGDSKSTAGSGSDPSINFSRPFYLPTHLDKCSTKAR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3976g00014 445 FunFam IQ-domain 11 87 138 - -
Pral3976g00014 445 PANTHER IQ-DOMAIN 5-RELATED 1 408 - -
Pral3976g00014 445 MobiDBLite consensus disorder prediction 17 36 - -
Pral3976g00014 445 MobiDBLite consensus disorder prediction 409 428 - -
Pral3976g00014 445 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Pral3976g00014 445 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Pral3976g00014 445 MobiDBLite consensus disorder prediction 409 432 - -
Pral3976g00014 445 SMART iq_5 87 109 IPR000048 GO:0005515
Pral3976g00014 445 SMART iq_5 110 131 IPR000048 GO:0005515
Pral3976g00014 445 MobiDBLite consensus disorder prediction 282 396 - -
Pral3976g00014 445 MobiDBLite consensus disorder prediction 262 396 - -
Pral3976g00014 445 Pfam IQ calmodulin-binding motif 90 109 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3976g00014 Pral-Chr3976 79764 82562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3976g00014 1 439 IQD Protein Family AT2G26180 62.613 9.93e-159 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3976g00014 - - qsu:112015613 620.157