Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3975g00011 ATGTCCAAAATGAAGCATCTACTGCGAAAGCTTCATATAGGTGGTGGGATCAATGAACCCCACAGGTTGCCTGATACCCGCCCGGTGATCACTCCCAGTCCCGTCCCTAATCTCCCATCATCTTCGTCGACGTTGGCATCGAATACAGTAGGCACAGTCCGGCCAAATGAATCGGTGGCTGATCGGACGGATATTGATGGTGCTGGTGGTTTACGTGGCGACAAGGGATCCGATTTTAATTTACTGGAGGAGGAGTTTCAATTGCAGTTGGCTTTAGCTATTAGCGCCTCCGATTCTGATGTCCGCAAGGACCCTGAGTCTGCCCAGATCGACGCTGCGAAGCAGATGAGCCTCGGCTGCGCAGCTTCCGTCACCGACACGGAAGCCCTCGTCCAGTTTCAATCGCTTCGTTATTGGAATTATAATCTCATTGATTATGAGGAGAAAGTGATGGATGGATTTTATGATTTATATGGATTCTCCTCAAACTTGACTGAACGAGGAAAGATGCCATTGTTGGTGGACCTGCAAACTGCTTCCCCCTCTGAAAATGTTGGCTGCGAAGTGATTCTTGTGAATCGTATGATTGATATTAAACTGAAACAGCTTGAGAAAAAAGCCTTTGCTGTATCCAAGGACTGTTGCTTATCTGAACAAGGGCTAGTTTCAAGTGGCTTGCTTCAGAAACTTGCTGATATTGTTGTTAATAGAATGGGTGGACCAGTCGGTGACCCTGATGAGATGCTGAAAAAGTGGACAGCACGTAGACGGGAGTTATGTGATTCTTTGAGGACGATTGTTATTCCCCTTGGCTGTCTTGATGTTGGACTTTCTCGCCATCGAGCCCTACTTTTTAAGGTGATGGCTGATAGAATTAATGTTCCCTGCATGCTGGTCAAAGGGAGCTATTACACTGGAACTGATGATGGAGCTGTGAATTTGATTAGAGCTGATGATGGAAGTGAATACATTATTGATTTGATGGGTGCACCTGGCACTCTTATTCCAACCGAGATACCCAGTAGTCAGCTCCAAAACTACAGTTTTGCTGTGACAGGTTGTGCTGAGATTGCAGAACTACCTAACAATGCCCATCTCATACTTGATGGTGGAACTAGAATGCTGGCCGTGTCATCTGATAGTGATAGAACTTCAACAGTGGGCAGGGCTCAATCAGAACAATTATGGAATGTGAACAGTGGAGGAATAATTGATCCAAGGAACCAAGGTGGAATGAATCAAACAGAAAGATTTGAACATGATTTGGGAAATCTTCTTCAGTCCATGCATATATCATGTGAAAGCACATCGCATAAAGAAGCATCATCTGCAGGAAAGATCCAAGTCAAGAATTTGTCAGAGTGTTTCCTTAGTGCAGCAAAGACCCCAGAGTTTGCTCAAAAACCGCGAGCTATCCCAATAGAGAATGGTGCATTCCCCCTTCCTGATCTCTTTTCAGATATCAATCGACAAAAAAGAAGTGAAAATAAATTTTATGAACAAATTCATCACGTGGATGGAAAATTTGTTGTTGATGCTTTTCAATCTGATCCAAGCTTTGAGAAGTCCTTCATATCTTCTCAAGTGGCGTGCTCTGCCTGTGATGCTAGATTCTTTCAATCCGCTGATTGGTTAGCTAAACAGAAAGAACTGGAGCAAAGTGATGCCATAGTTGCAGATACAGGTCCTGTCAATCTGCTGAAGATGCATGAAGAACAATTTTTTGATTCTTCCTTGACCAAGGCAGTTGTTTCTTGCAAGAGGCAAATTGAGGCTGACTCCGTCTATGATGATGCAAATGGTATTGATGATAAAGTTGGAGTGGTTTTTAATTGCAATCAACTTGGGAATGATTCTGCTTTTCAATTTAAAGAAGCAGACAATAGAGATAGTAAGCTAAAAGATGGTAAAAGTGAGAAAGTTAAGTCAGTACTGGGTGAGGGCACAGAATGGGAAATTCAATGGGAGGATCTTCATATTGGTGAACGTATTGGTATAGGTTCTTATGGTGAGGTTTACCATGCTGACTGGAAGGGGACTGAAGTTGCTGTGAAGAAGTTTCTGAACCAAGACTTTTCTGGTGATGCGTTGGCTCAGCTCAGATCTGAAGTTGAGATCATGTTGAGGCTGCGGCATCCAAATGTTGTACTTTTCATGGGAGCTATTACAAGGCCACCACATTTTTCTATATTGACAGAGTTTCTTCCAAGAGGGAGTTTATATAGGCTATTGCATCGACCCAATTTGGAACTTGATGAGAATAGGAGGTTGCGAATGGCTCTTGATGTGGCAAAAGGTATGAATTATTTGCACACAAGCCATCCTCCAATTGTTCATCGGGATTTGAAGTCTCCAAATCTTCTTGTTGACAAACATTGGGTTGTTAAGGTTTGTGATTTTGGTTTGTCACGTATGAAGCACCATACCTTTCTATCCTCAAAATCTTCTGCTGGGACGCCGGAGTGGATGGCACCAGAAGTATTAAGAAATGAACCAGCCAATGAGAAATGTGATGTGTATAGTTTTGGGGTGATTTTGTGGGAATTGGCTACTGCAAGGATCCCATGGAAAGGGTTGAACCCAATGCAGGTTGTTGGCGCTGTTGGATTCCAAAATAGACGGCTTGAAATTCCTGAAGATGTTGATCCAGTGGTAGCACAAATAATACGCGACTGTTGGCAAATGGAGCCACACTTACGGCCATCATTCTCTCAGCTGATGTCTCGTCTCCGCCATCTTCAACATCTGATTGTGAAAGATAGGAGCCCAATGCAATAA 2778 0.4338 MSKMKHLLRKLHIGGGINEPHRLPDTRPVITPSPVPNLPSSSSTLASNTVGTVRPNESVADRTDIDGAGGLRGDKGSDFNLLEEEFQLQLALAISASDSDVRKDPESAQIDAAKQMSLGCAASVTDTEALVQFQSLRYWNYNLIDYEEKVMDGFYDLYGFSSNLTERGKMPLLVDLQTASPSENVGCEVILVNRMIDIKLKQLEKKAFAVSKDCCLSEQGLVSSGLLQKLADIVVNRMGGPVGDPDEMLKKWTARRRELCDSLRTIVIPLGCLDVGLSRHRALLFKVMADRINVPCMLVKGSYYTGTDDGAVNLIRADDGSEYIIDLMGAPGTLIPTEIPSSQLQNYSFAVTGCAEIAELPNNAHLILDGGTRMLAVSSDSDRTSTVGRAQSEQLWNVNSGGIIDPRNQGGMNQTERFEHDLGNLLQSMHISCESTSHKEASSAGKIQVKNLSECFLSAAKTPEFAQKPRAIPIENGAFPLPDLFSDINRQKRSENKFYEQIHHVDGKFVVDAFQSDPSFEKSFISSQVACSACDARFFQSADWLAKQKELEQSDAIVADTGPVNLLKMHEEQFFDSSLTKAVVSCKRQIEADSVYDDANGIDDKVGVVFNCNQLGNDSAFQFKEADNRDSKLKDGKSEKVKSVLGEGTEWEIQWEDLHIGERIGIGSYGEVYHADWKGTEVAVKKFLNQDFSGDALAQLRSEVEIMLRLRHPNVVLFMGAITRPPHFSILTEFLPRGSLYRLLHRPNLELDENRRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSSAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELATARIPWKGLNPMQVVGAVGFQNRRLEIPEDVDPVVAQIIRDCWQMEPHLRPSFSQLMSRLRHLQHLIVKDRSPMQ 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3975g00011 925 PRINTS Tyrosine kinase catalytic domain signature 771 789 IPR001245 GO:0004672|GO:0006468
Pral3975g00011 925 PRINTS Tyrosine kinase catalytic domain signature 818 828 IPR001245 GO:0004672|GO:0006468
Pral3975g00011 925 PRINTS Tyrosine kinase catalytic domain signature 837 859 IPR001245 GO:0004672|GO:0006468
Pral3975g00011 925 PRINTS Tyrosine kinase catalytic domain signature 732 745 IPR001245 GO:0004672|GO:0006468
Pral3975g00011 925 PRINTS Tyrosine kinase catalytic domain signature 881 903 IPR001245 GO:0004672|GO:0006468
Pral3975g00011 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Pral3975g00011 925 Pfam Ethylene-responsive protein kinase Le-CTR1 132 335 - -
Pral3975g00011 925 SMART serkin_6 658 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3975g00011 925 ProSitePatterns Protein kinases ATP-binding region signature. 664 686 IPR017441 GO:0005524
Pral3975g00011 925 MobiDBLite consensus disorder prediction 13 71 - -
Pral3975g00011 925 MobiDBLite consensus disorder prediction 36 56 - -
Pral3975g00011 925 FunFam Serine/threonine-protein kinase CTR1 737 920 - -
Pral3975g00011 925 Gene3D Phosphorylase Kinase; domain 1 651 735 - -
Pral3975g00011 925 Pfam Protein tyrosine and serine/threonine kinase 658 910 IPR001245 GO:0004672|GO:0006468
Pral3975g00011 925 FunFam Serine/threonine-protein kinase isoform 1 649 736 - -
Pral3975g00011 925 CDD STKc_MAP3K-like 664 910 - -
Pral3975g00011 925 SUPERFAMILY Protein kinase-like (PK-like) 648 909 IPR011009 -
Pral3975g00011 925 Gene3D Transferase(Phosphotransferase) domain 1 737 921 - -
Pral3975g00011 925 ProSiteProfiles Protein kinase domain profile. 658 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3975g00011 925 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 153 913 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3975g00011 Pral-Chr3975 25307 33444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3975g00011 1 922 MAP Kinase Kinase Kinase AT5G11850 53.757 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral3975g00011 PK_Tyr_Ser-Thr 5.6e-65 CL0016