Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral3970g00088 | ATGTTCTTCCATGACGACGTCGTCCGATCCCTCCAGTTCCCTTCATGCACGCTTCAATCCTTGCTGACTCCAGGTGAGGTAGAGGAGTTATTGTCCCTCATTCGAGGCGAGGATCCGGCCAGTCCCAGCTCCGGTTCGCAAGCATCAACCCGGGCACTTTACTCGTTGGACGAGAGAAGGCGCAGGCGCATGCAGTCGAACAGGGAGTCAGCCCGGCGGTCCCGCTGGAGAAAGAAGAAGCATTTAGAGAACCTCACGAGCCAAGTGAACCGCCTAAAAACTGAAAACCGAGAACTCAAAAACCAGCTGGGCTTCACCCTTCACCAGCACGTCATAGTCTCCCTCGAGAACGCCCAACTAAGATCCGAATCCGAATTCCTCATGTCCCGGCTGTCGCATCTATATCGGGCTCTGGATACCACTCTAAGCCCCTAA | 435 | 0.5494 | MFFHDDVVRSLQFPSCTLQSLLTPGEVEELLSLIRGEDPASPSSGSQASTRALYSLDERRRRRMQSNRESARRSRWRKKKHLENLTSQVNRLKTENRELKNQLGFTLHQHVIVSLENAQLRSESEFLMSRLSHLYRALDTTLSP | 144 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral3970g00088 | 144 | SMART | brlzneu | 55 | 119 | IPR004827 | GO:0003700|GO:0006355 | |
Pral3970g00088 | 144 | PANTHER | BZIP TRANSCRIPTION FACTOR 44 | 43 | 140 | - | - | |
Pral3970g00088 | 144 | MobiDBLite | consensus disorder prediction | 54 | 71 | - | - | |
Pral3970g00088 | 144 | Gene3D | - | 57 | 110 | - | - | |
Pral3970g00088 | 144 | FunFam | BZIP transcription factor | 57 | 108 | - | - | |
Pral3970g00088 | 144 | Coils | Coil | 82 | 109 | - | - | |
Pral3970g00088 | 144 | MobiDBLite | consensus disorder prediction | 39 | 53 | - | - | |
Pral3970g00088 | 144 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 57 | 103 | IPR004827 | GO:0003700|GO:0006355 | |
Pral3970g00088 | 144 | MobiDBLite | consensus disorder prediction | 36 | 80 | - | - | |
Pral3970g00088 | 144 | Pfam | bZIP transcription factor | 59 | 103 | IPR004827 | GO:0003700|GO:0006355 | |
Pral3970g00088 | 144 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 62 | 77 | IPR004827 | GO:0003700|GO:0006355 | |
Pral3970g00088 | 144 | SUPERFAMILY | Leucine zipper domain | 59 | 110 | IPR046347 | GO:0003700|GO:0006355 | |
Pral3970g00088 | 144 | CDD | bZIP_plant_GBF1 | 64 | 110 | IPR045314 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral3970g00088 | Pral-Chr3970 | 602310 | 603189 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral3970g00088 | 44 | 139 | bZIP Transcription Factor Family | AT2G18160 | 41.667 | 1.76e-20 | 80.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Pral3970g00088 | bZIP_1 | 9.8e-11 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral3970g00088 | - | - | gmx:102668006 | 148.673 |