Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00066 ATGGATCATTCGCTGTCCAGCCTTCTCTGCCAAGAAAACCAAGGAGAAGTGGCGGTGGATGAAGATTTATACGTTCATTTTGAGGATTCTAGTGTTTCAGAGGATGATGAGTATGTGGAAGTTTTGATTGAGAAAGAGATCGGATTTGGGTTCGGAAGGGACGAAGAATCTTTGTTGTTGAGTGATTGGATCAAAACTGCTCGCTTGTATGCCATCAATTGGATTCTCAAAACAAGAGCAACATTCGGCTTTCGTTTTCAAACGGCTTACTTGTCTGTCACATACTTCGACCGATTCCTTTGTAGACGGTCCATTGATAGTGACAAGTGTTGGGCATTTCGGTTACTATCAGTCGCATGCCTTTCTCTGGCTTCTAAGATGGAGGAGTGCGATGTTCCGGCACTTTCAGAGTTTCCTTCACAAGATTATAACTTTGAAAGCAAATTGATTCAGAGAATGGAGCTTTTGGTGCTCTCCGCATTAGAATGGAACATGAACCTCACTACTCCCTTTGCCTTTTTACCTTATTTCATCTCAAAGTTCTGCAACCAATCCCCACCAGCTCGTATTTGGTCCAACATTATGCAGCTCATCTCCACATTTATGACAGAGGTCAATTTGATGGATCATAGGCCTTCTGTGATAGCGGCGGCGGCTACTTTGGTGGCAATTGATCCGCATTTGACAAGAAATGCCGTGGAATTGAAGATGAGTTCGGTTTCTCAACACTGGAGTCTCGAAATTGAAAACATAGTTGCGTGCTATGATTTAATCCAGAGATTATACAAGGAGAAAACTGAAAGAGACAAGATTATGCATCCCTCCAGTCCTCCGCCGCCTATCGGATCGATGGCAACCGACAAGCTTGAGACTTCTGTAGTTAGTTCTGCTGTTACGTCCAAGAGAAGAAGACTCACATTCCCTGATCACCAAGAAGGTCATGGCAAACATGACGCAAGTTAA 963 0.4361 MDHSLSSLLCQENQGEVAVDEDLYVHFEDSSVSEDDEYVEVLIEKEIGFGFGRDEESLLLSDWIKTARLYAINWILKTRATFGFRFQTAYLSVTYFDRFLCRRSIDSDKCWAFRLLSVACLSLASKMEECDVPALSEFPSQDYNFESKLIQRMELLVLSALEWNMNLTTPFAFLPYFISKFCNQSPPARIWSNIMQLISTFMTEVNLMDHRPSVIAAAATLVAIDPHLTRNAVELKMSSVSQHWSLEIENIVACYDLIQRLYKEKTERDKIMHPSSPPPPIGSMATDKLETSVVSSAVTSKRRRLTFPDHQEGHGKHDAS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00066 320 Gene3D - 66 166 - -
Pral3970g00066 320 SMART cyclin_7 73 159 IPR013763 -
Pral3970g00066 320 Pfam Cyclin, N-terminal domain 66 166 IPR006671 -
Pral3970g00066 320 CDD CYCLIN_AtCycD-like_rpt1 67 163 - -
Pral3970g00066 320 Pfam Cyclin, C-terminal domain 169 267 IPR004367 -
Pral3970g00066 320 CDD CYCLIN_AtCycD-like_rpt2 168 258 - -
Pral3970g00066 320 PANTHER CYCLINS 34 263 IPR039361 -
Pral3970g00066 320 FunFam Cyclin-D5-1 63 166 - -
Pral3970g00066 320 Gene3D - 167 256 - -
Pral3970g00066 320 MobiDBLite consensus disorder prediction 288 302 - -
Pral3970g00066 320 SUPERFAMILY Cyclin-like 151 271 IPR036915 -
Pral3970g00066 320 MobiDBLite consensus disorder prediction 267 320 - -
Pral3970g00066 320 SMART Cyclin_C_2 168 280 IPR004367 -
Pral3970g00066 320 MobiDBLite consensus disorder prediction 303 320 - -
Pral3970g00066 320 SUPERFAMILY Cyclin-like 35 166 IPR036915 -
Pral3970g00066 320 ProSitePatterns Cyclins signature. 68 99 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00066 Pral-Chr3970 473467 475756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00066 4 251 Core Cell Cycle Gene Families AT4G37630 36.704 8.77e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00066 K18811 - gmx:100798728 340.887