Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00047 ATGACCCCGCTGTCCCGAGAAGATGAATCCCCAGAAGACGACAAGGACGAAGAAGCCAACCGCTTGCTTCAATCTGAATCCCGGCCTTCGTCTTTGGACGACGAAGAGGCCGCTTATGAGGCGGGGGAGAAAATTCTCATTGTAGATTTAGACTCTATCGATGATAAGGATTCGATGACGGTGCCGCCTTTCTCGTGGAAGAAGCTATGGCTATTCACGGGACCGGGCTTCTTGATGAGCATAGCTTTTTTGGATCCGGGAAATCTCGAAGGAGATCTCCAGTCTGGAGCCATCGCCGGCTACTCCCTGCTCTGGCTATTGATGTGGGCCACAATTATGGGATTGATGATTCAGCTTCTTTCCGCAAGGATCGGGGTGGTCACTGGTCGGAACCTGGCGGAGCTGTGCAGAGACGAATATCCAAATTGGGCTAGGTTGGTGCTGTGGTTCATGGCCGAGCTGGCCTTGATTGGTGCTGACATTCAAGAGGTCATCGGGAGTGCCATCGCAATACAAATTCTTAGCCATGGGGTGTTGCCGCTTTGGGCTGGAGTCGTGATTACTGCTTCCGATTGTTTCTTCTTTTTATTTCTTGAGAATTATGGAGTAAGGAAGCTGGAAGCTGTTTTTGCAGTTCTCATTGGGACAATGGCCCTTTCTTTTGCCTGGATGTTTGGTGACGCCAAACCTAGTGGAAAAGAACTCATGATGGGAATTTTAGTTCCAAGACTTAGCTCAAAAACAATTCGTCAGGCTGTGGGGGTTGTGGGTTGCGTCATAATGCCTCACAACGTGTTCTTACATTCTGCTTTGGTGCAGTCAAGGGAAATTGATCCCCGTAAGAAAGGCCAGGTGCAGGAGGCTCTTAACTACTATTCCATTGAGTCAACAGTTGCTCTTTCAGTCTCCTTCATCATCAACCTATTTGTCACCACAGTTTTTGCTAAGGGGTTTTACAGTTCAAAGCAGGCCAGTAGCATAGGATTGGTTAATGCAGGGCAGTATCTTCAGGAAAAGTATGGAGGAGGGCTCTTCCCAATTCTTTATATATGGGGTATTGGGTTATTGGCAGCTGGGCAGAGTAGCACCATTACTGGCACATATGCTGGGCAGTTCATTATGGGAGGTTTTCTCAACCTTCGTTTAAAGAAATGGTTAAGGGCATTAATCACTCGAAGTTTTGCAATTCTGCCAACAATGGTTGTAGCTATTGTTTTTAATACATCTGAAGCATCATTGGACATTCTGAATGAGTGGCTGAACGTGCTTCAGTCGATGCAAATTCCTTTTGCACTTATCCCTCTGCTCACCTTGGTCTCCAAAGAACAGGTCATGGGGACCTTTAGGATTGGACTTGTTCTTGAGAGGGTAGCGTGGACTATTGCTGCGCTGATAATGGTGATCAATGGGTATCTATTGTTAGATTTCTTCCTGTCGGAAGTGAAAGGTCTGCTGTTTGGTTTTGTAGTTTGCTCCTGCACAGCTGCTTATGTGGCATTCATTGTATATTTGATTTCCCTAAGTGGTGCTGTTCCTTTTTCTTGGGTTAATCTACTCGCCAAGAGATTTTCTCTCTCTGAGGTTTGA 1587 0.4644 MTPLSREDESPEDDKDEEANRLLQSESRPSSLDDEEAAYEAGEKILIVDLDSIDDKDSMTVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATIMGLMIQLLSARIGVVTGRNLAELCRDEYPNWARLVLWFMAELALIGADIQEVIGSAIAIQILSHGVLPLWAGVVITASDCFFFLFLENYGVRKLEAVFAVLIGTMALSFAWMFGDAKPSGKELMMGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSREIDPRKKGQVQEALNYYSIESTVALSVSFIINLFVTTVFAKGFYSSKQASSIGLVNAGQYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWLRALITRSFAILPTMVVAIVFNTSEASLDILNEWLNVLQSMQIPFALIPLLTLVSKEQVMGTFRIGLVLERVAWTIAALIMVINGYLLLDFFLSEVKGLLFGFVVCSCTAAYVAFIVYLISLSGAVPFSWVNLLAKRFSLSEV 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00047 528 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 67 445 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 NCBIfam Nramp family divalent metal transporter 74 443 - -
Pral3970g00047 528 Hamap Divalent metal cation transporter MntH [mntH]. 55 477 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 Pfam Natural resistance-associated macrophage protein 90 450 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 PRINTS Natural resistance-associated macrophage protein signature 203 224 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 PRINTS Natural resistance-associated macrophage protein signature 359 378 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 PRINTS Natural resistance-associated macrophage protein signature 178 197 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 PRINTS Natural resistance-associated macrophage protein signature 252 275 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 PRINTS Natural resistance-associated macrophage protein signature 421 440 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 PRINTS Natural resistance-associated macrophage protein signature 148 174 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 PRINTS Natural resistance-associated macrophage protein signature 387 404 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pral3970g00047 528 MobiDBLite consensus disorder prediction 16 35 - -
Pral3970g00047 528 MobiDBLite consensus disorder prediction 1 35 - -
Pral3970g00047 528 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 55 506 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00047 Pral-Chr3970 358177 362822 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00047 8 508 Inorganic Solute Cotransporters AT1G47240 80.080 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00047 K21398 - qsa:O6P43_018984 893.649