Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00044 ATGGAGACCCGCGCAGCCAAGAAGAGGGCAGAAGCCGATGCCATTGCCCAGCACGAGTCTTCCAACAAGAGGCGTGTGGTGTTGGGGGAACTATCAAATTTACCAAATGCCATCTTTCCCGCTATTTTGAATCAGAAATGTCGAAAGAAGACCCTTTCACTGGATCATGATGCCGATATCAAGGACAATAAGGCAGCGCCCGTTGATTCTAAGTCAGACGCTGATGCCAATCTGAACGATCAGCAAAAGATCGATCCTCCAGCGTCTCAAATCTATCAATACCTTCACAAAATGGAGATGGAGCCGAAGCGGAGACCAATGCCTGACTACCTCGAGAAGGTTCAAAAGAACGTCAGTGCTAATGCTAGAGGGATATTGATTAATTGGTTAGCGGAGGTGGCGGAGGAGTACAGGCTTCTCTCGGATACGCTTCATCTCTCGGTTTCTTACATTGACAGGTTCCTCTCTGCCAAGACCGTCAGTAAGCAGAGGCTTCAGTTGCTCGGCGTATCATCCATGTTCATTGCATCGAAGTATGAAGAAATCAGCCCTCCTCGTGTGGAAGACTTCTGCTACATAACTGATAATACGTACACCCAGGCAGAAGTAGTGGAGATGGAAGCTCATGTCCTTAAGTACTTGAATTTTGAAATGGGAAGTCCTACGGTAAAGACATTTCTAAGGAGGCTTGCTGGGATTGCTAGTGAGTATCAGAAAACCCATAAATTGCAGTTTGAGTTTCTGGCATACTATCTTGGTGAGCTAAGTTTGCTGGATTACAATTGCGTAAAATTCTTGCAGTCTATGGTGGCTGCATCAGCTATTTTTCTTGCCAGATTTATCATCTGGCCTAAAGTCCATCCCTGGAATTCAGCCCTGCAAGGATACTCTGGATACAAGCCGCATGACTTAAAACAATGCGTGCTTATCTTACACGACTTGTACTTGGCAAGAAAAGCGGGCTTTTTGCAAGCTATACGAGAGAAGTACAGGCAGCACAAGTTCAAGAATGTGGCTACCCTGCCATCCCCTCCGGAGATACCAGATACTTATTTCGACAAATGGTGA 1068 0.4607 METRAAKKRAEADAIAQHESSNKRRVVLGELSNLPNAIFPAILNQKCRKKTLSLDHDADIKDNKAAPVDSKSDADANLNDQQKIDPPASQIYQYLHKMEMEPKRRPMPDYLEKVQKNVSANARGILINWLAEVAEEYRLLSDTLHLSVSYIDRFLSAKTVSKQRLQLLGVSSMFIASKYEEISPPRVEDFCYITDNTYTQAEVVEMEAHVLKYLNFEMGSPTVKTFLRRLAGIASEYQKTHKLQFEFLAYYLGELSLLDYNCVKFLQSMVAASAIFLARFIIWPKVHPWNSALQGYSGYKPHDLKQCVLILHDLYLARKAGFLQAIREKYRQHKFKNVATLPSPPEIPDTYFDKW 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00044 355 SMART cyclin_7 128 212 IPR013763 -
Pral3970g00044 355 SMART cyclin_7 225 313 IPR013763 -
Pral3970g00044 355 MobiDBLite consensus disorder prediction 1 20 - -
Pral3970g00044 355 SUPERFAMILY Cyclin-like 221 346 IPR036915 -
Pral3970g00044 355 Gene3D - 106 219 - -
Pral3970g00044 355 MobiDBLite consensus disorder prediction 63 83 - -
Pral3970g00044 355 Pfam Cyclin, C-terminal domain 221 344 IPR004367 -
Pral3970g00044 355 Gene3D - 91 340 - -
Pral3970g00044 355 CDD CYCLIN_AtCycA-like_rpt2 221 335 - -
Pral3970g00044 355 PIRSF Cyclin_A_B_D_E 2 351 IPR046965 GO:0016538|GO:0044772
Pral3970g00044 355 SMART Cyclin_C_2 221 344 IPR004367 -
Pral3970g00044 355 Pfam Cyclin, N-terminal domain 91 218 IPR006671 -
Pral3970g00044 355 FunFam Cyclin A1 207 340 - -
Pral3970g00044 355 ProSitePatterns Cyclins signature. 123 154 IPR006671 -
Pral3970g00044 355 PANTHER CYCLINS 80 332 IPR039361 -
Pral3970g00044 355 SUPERFAMILY Cyclin-like 81 218 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00044 Pral-Chr3970 348234 350155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00044 3 353 Core Cell Cycle Gene Families AT5G43080 56.818 2.53e-137 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00044 K06627 - zju:107420528 451.055