Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00042 ATGGTGATGGAACTTCCTCAATGGTTTGTTCCAGCTTCGTGCGTCTTCATCTTGATTTGTATATCCACTCTGATACTCAGGCGAGATGGGAAACGGAAAAGCCTTCCACCTGGCCCGCCCGGCTTGCCTGTCATCGGCCATCTTCATCTCATGAAGCCACCCATTCACCGAACTCTTCAGAAACTCAGTGAGAAATACGGCCCCGTCATGTTCCTTCGCTTCGGCTCTCTCAAAGTTCTGGTGGTCTCTTCGCCATCGGCCGTGGAAGAATGCTTCACCAAGAACGACATCGTTTTCGCCAACCGCCCTGCCACACTTGCCGGGAAACACCTCAATTACGACTACAAGACCGTGGGATTCGCCCCTTATGGCGATCACTGGAGAGGCCTCCGGCGGCTAATAAATCAGGAACTTTTCTCTGTGAGCAGACTCTCCATGTTAAGCGACGTGAGGATGGATGAAGTCCTGCTTCTGGTAAAGCAACTGTTCGGAAAGTCAGGACGAAGCTGGATGAAAGTGGAACTCAGACACAGATTCGTGGACCTTATTTTCGATGTGACGTTGAGGATGATCTCAGGGAAGAGGTATTATGGGACGGACGTGGTGTCGAAGGAAGCGACGGATTTTAAGAATATGATGGGCGAAATTTTCGAACTTCTTAATCCCGCTGTGGATGACCTTTTCCCAATACTACGACGGCTCGACCTCTTTGGGGTGCAAAGAAGGATGAAGCGAGTGATGAAGAAGCAGGACAGTTTTCTTCAGAACCTGCTTGACGAGCACAGGAGAAAACGAAGCTCCAGCAGCAACATTGGCGCCAACCAGGAGAAAAAGACCATGACCTTGATTGAAGTCATGTTGTCTCTCCAAAAAACGGATCCGGTGTTCTACTCCGACACAAACATCAAAGGAATTGCAGCGGCAGTGGTAGCGGCGGGGACGGAAACTTCAGCATCGACCATGGAATGGGCACTTGCAGTTCTGCTGAACCATCCAGAGGTAATGGAAAAGTTGAAGACGGAGATAGACACTCACGTTGGAAAAGAGCGATTCATGAATGAATCAGACATACCCAAGCTCACATATCTGCAGAACGTAGTGTTAGAAACTCTGCGCATATATCCCGCCGGAGCTCTCGGAGTGCCCCACATGAACTCAGAGGACAGTACGATCAGTGGTTACCACGTCCCCAAAGGGACAATGTTGATGGTCAACTTGTGGGTGCTGCACAAGGATCCAAAACACTGGAAGGATGCCACTAAGTTTATGCCAGAGAGGTTCGAGAATGGGCAAGGCTCTGAGGGCTATAACCTGATTCCATTTGGTGCTGGAAGGAGGCAGTGCCCTGGGGCTAATCTGGCCAAGAGAATCATGGCCTTGACTATTGGATTGCTGGTTCAGGTGTTTGAGTGGAAGAGGATTGGGGATCAGGAGATCAACATGATGGAGGGAGATGGTCTTACACTCCCCAGACTTGAGCCTCTGGTTGCACTCATACGGCCACGCCAAGAGATGCTGCCCCTTCTCTCCAGCTTGTGA 1539 0.5042 MVMELPQWFVPASCVFILICISTLILRRDGKRKSLPPGPPGLPVIGHLHLMKPPIHRTLQKLSEKYGPVMFLRFGSLKVLVVSSPSAVEECFTKNDIVFANRPATLAGKHLNYDYKTVGFAPYGDHWRGLRRLINQELFSVSRLSMLSDVRMDEVLLLVKQLFGKSGRSWMKVELRHRFVDLIFDVTLRMISGKRYYGTDVVSKEATDFKNMMGEIFELLNPAVDDLFPILRRLDLFGVQRRMKRVMKKQDSFLQNLLDEHRRKRSSSSNIGANQEKKTMTLIEVMLSLQKTDPVFYSDTNIKGIAAAVVAAGTETSASTMEWALAVLLNHPEVMEKLKTEIDTHVGKERFMNESDIPKLTYLQNVVLETLRIYPAGALGVPHMNSEDSTISGYHVPKGTMLMVNLWVLHKDPKHWKDATKFMPERFENGQGSEGYNLIPFGAGRRQCPGANLAKRIMALTIGLLVQVFEWKRIGDQEINMMEGDGLTLPRLEPLVALIRPRQEMLPLLSSL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00042 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Pral3970g00042 512 CDD CYP81 67 495 - -
Pral3970g00042 512 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PANTHER CYTOCHROME P450 82C3-RELATED 16 503 - -
Pral3970g00042 512 Gene3D Cytochrome P450 28 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 SUPERFAMILY Cytochrome P450 36 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral3970g00042 512 FunFam Cytochrome P450 82C4 26 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00042 Pral-Chr3970 334576 337913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00042 15 502 Cytochrome P450 AT4G37340 46.076 5.85e-151 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00042 - - peu:105128996 577.785