Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00036 ATGCATATCTTAATCGTCTTCCTCCTTTCTTTTGCACTGTGCATCCCTCTTCCGTGTTCATCTGCAGCGACAGATACCCTCCTACAAGGCTCGTCACTCTCAGTTGAGAAACCAACCGATACACTCGTGTCAGCCAATGGCGCCTTCTCCGCTGGTTTCTTTCAAGTGGGCGACAATGCTTTCTGCTTTTCCATATGGTTCACAAAGTCCAAGCGACCCACTCTTGTCTGGATTGCAAATCGAGACCAACCCGTTAATGGGAGGGCTTCAAGGTTTACGCTTTCGAAAAATGGCAACCTCATCTTGAGCGATGCAGGCGTAGCTACCATTTGGACCACAAAGACCTTCTCCTCTTCGGAAGTGCATCTCATGCTCAAGGACAACGGCAACCTCGTTCTTCGCACCTCGCAAGGCGCTGTCTTATGGCAAAGTTTTGACTCCCCAACCGATACCCTTCTTTCCGGTCAGCCACTAACCGAGAAAGCAAGCCTCATTGCATCCAGAAGCACCACAAACTTTTCTTCTGGTTTCTATAAGCTTTACTTCGATAATGATAATGTTCTTCGGCTTCTTTTCAAAGGGCCCAACCTTTCTAGCGTGTACTGGCCTCCCACGTGGAAACTGCCCGTTGATGAAGGCAGGTCCACCTACAACATAACTAAAATCGCGGTGCTAGATCCCCTCGGCCATTTCACGTCCTCTGATACTTTCGAATTCTATCCATCTGATTATGGTGTTAAACGCTACAGGCGATTCACGGTGGATCCTGATGGTAACTTGCGTCTCTACAGTTTCAATGAAAAAACTAGCATGTGGGAGGTCTCATGGCAAGTCATAGCCGAACCATGCAGTGCTCACGGTCTTTGTGGAGCTAACAGCATGTGCACTTACGATCCTTTCATAGGAAGGACCTGTTATTGCTTGCAAGGATTCAAGATTAAGAATCCCAATGACTGGACTCAGGGTTGTGAACCTGAATTTACAAGCCCTAGTTGCAATTCTGCAGACTTTGGTTTTGTTCATCTTCCCAGGATGGAACTATTCGGCTATGACTTGGAGGTGATCCGTGTAACAAACTTGACACAATGTGAAAATAGGTGCTTGGAACTTTGTGATGATTGCAAAGGCGTCCAACTCAAATTCAACGAAGTTAGTACTTATAATTGCTACATCAAAACGATATTGCTCAATGGGCGGGATTCCCCAAATTTCGATGGCGATATCTATCTCAAATTGCCAAAATCCACTATGCTTTCCCTCAAAGTTCCTCAGAAACATGTACAACTGAATTGCCCAGCCAATCTATCTCAGAGGTTGGATAGAACTTACCAAGATCCGAAAAAGAATGCGTGGTTGAATTTTTTGCTTTGGTTCGCTTGTGGGATTGGAGCATTCGAGATTACCTGCGTCTTCTTTGTATGGTTCTTCTTGTTTAGAAGCAGTAAGGAAAATGATAAAGTAGAAAGACAGCAACTGCTTTCTGCCACAGGGTTCCAAAAGTTCACCTATTCAGAGCTCAAAAAGGCCACAAGTGGATTCAGCGATGAGGTTGGACGAGGAGCAGGAGGGATCGTGTACAAAGGGACATTAGACGATGATCGCGTGGCAGCAGTCAAGTGCCTTATTAGCGAAACTGATCAAGGAGAAGCAGAGTTTCTGGCTGAAATTAGCACTATTGGGATGTTGAACCACATGAATTTGATAGACATGTGGGGATACTGCGTGGAGGGGAAGCACAGACTGTTAGTGTACGAGTACATGGAGCATGGATCCTTAGCAGAGAATCTCCACTCCAATGAGCTTGACTGGAACAAAAGGTTTAATATTGCAGTTGGGACGGCCAAAGGTTTAGCTTACTTGCACGAAGAATGCTTGGAATGGGTTCTGCATTGCGATGTGAAGCCTCAAAACATACTCCTAGATTCAGAGTTCCAACCCAAAGTAGCTGATTTTGGCTTGTCTAAGCTGCTTAACAGGGATGAGCGTGCCAATTCTGGTTTTTCTAGAATAAGAGGGACGAGGGGGTACATGGCACCTGAATGGGTGTACAATCTCCGAATTACTTCTAAAGTGGACGTATACAGCTATGGGATCGTGGTTCTGGAAATGATAACTGGAAAAAGTCCAATGGGAATCCATAGCCTGGAAAATAAAGGAGGAATAGATCAACGCAGGTTGGTGACGTGGGTGAAGGAGAAGTTGAACGGTGCTCCGGCGAGCGAGAGCTGGATTGAGGAGATAACAGATCCGAATATGCAAGGAAATTACGACGCTGCTAAGGTGGAGTTGTTGGTCAAAGTGGCTTTGCGGTGTGTGGAAGATGACATGGATGCAAGGCCCTCCATGAGCCAAGTAGTGGAGATGCTCCAGTTTCCAGAATACATATCCTTCCAGTAA 2397 0.4589 MHILIVFLLSFALCIPLPCSSAATDTLLQGSSLSVEKPTDTLVSANGAFSAGFFQVGDNAFCFSIWFTKSKRPTLVWIANRDQPVNGRASRFTLSKNGNLILSDAGVATIWTTKTFSSSEVHLMLKDNGNLVLRTSQGAVLWQSFDSPTDTLLSGQPLTEKASLIASRSTTNFSSGFYKLYFDNDNVLRLLFKGPNLSSVYWPPTWKLPVDEGRSTYNITKIAVLDPLGHFTSSDTFEFYPSDYGVKRYRRFTVDPDGNLRLYSFNEKTSMWEVSWQVIAEPCSAHGLCGANSMCTYDPFIGRTCYCLQGFKIKNPNDWTQGCEPEFTSPSCNSADFGFVHLPRMELFGYDLEVIRVTNLTQCENRCLELCDDCKGVQLKFNEVSTYNCYIKTILLNGRDSPNFDGDIYLKLPKSTMLSLKVPQKHVQLNCPANLSQRLDRTYQDPKKNAWLNFLLWFACGIGAFEITCVFFVWFFLFRSSKENDKVERQQLLSATGFQKFTYSELKKATSGFSDEVGRGAGGIVYKGTLDDDRVAAVKCLISETDQGEAEFLAEISTIGMLNHMNLIDMWGYCVEGKHRLLVYEYMEHGSLAENLHSNELDWNKRFNIAVGTAKGLAYLHEECLEWVLHCDVKPQNILLDSEFQPKVADFGLSKLLNRDERANSGFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMITGKSPMGIHSLENKGGIDQRRLVTWVKEKLNGAPASESWIEEITDPNMQGNYDAAKVELLVKVALRCVEDDMDARPSMSQVVEMLQFPEYISFQ 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00036 798 CDD B_lectin 41 148 IPR001480 -
Pral3970g00036 798 Gene3D Phosphorylase Kinase; domain 1 477 586 - -
Pral3970g00036 798 Pfam D-mannose binding lectin 74 160 IPR001480 -
Pral3970g00036 798 PANTHER OS07G0415500 PROTEIN 7 790 - -
Pral3970g00036 798 Pfam S-locus glycoprotein domain 245 314 IPR000858 GO:0048544
Pral3970g00036 798 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Pral3970g00036 798 Pfam Protein kinase domain 515 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3970g00036 798 Gene3D Transferase(Phosphotransferase) domain 1 587 794 - -
Pral3970g00036 798 CDD PAN_AP_plant 328 413 - -
Pral3970g00036 798 PIRSF SRK 1 793 IPR024171 GO:0004674
Pral3970g00036 798 Gene3D - 19 147 IPR036426 -
Pral3970g00036 798 CDD STKc_IRAK 517 790 - -
Pral3970g00036 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Pral3970g00036 798 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Pral3970g00036 798 SUPERFAMILY Protein kinase-like (PK-like) 494 792 IPR011009 -
Pral3970g00036 798 ProSiteProfiles Protein kinase domain profile. 511 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3970g00036 798 FunFam Serine/threonine-protein kinase 587 795 - -
Pral3970g00036 798 ProSiteProfiles PAN/Apple domain profile. 332 413 IPR003609 -
Pral3970g00036 798 SMART ntp_6 334 412 IPR003609 -
Pral3970g00036 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 203 IPR036426 -
Pral3970g00036 798 SMART serkin_6 511 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3970g00036 798 SMART blect_4 30 148 IPR001480 -
Pral3970g00036 798 FunFam S-receptor-like serine/threonine-protein kinase 480 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00036 Pral-Chr3970 304066 306915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00036 453 790 Receptor kinase-like Gene Family AT5G45780 37.249 9.21e-67 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral3970g00036 Pkinase 8.7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00036 - - gmx:100816469 1134.4