Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00034 ATGGCTCATCATCAGCATCAACTAGACAACCCCAGGTTCCATTTGGATGCCTTGTACTGTTCTGAAGAGCACTGGGAGGAACAAACTGGCCCCGAGTATTTCCAACAGGAATTAGAACAAGTAGACGAGTGTTATCTTGGCTGTGATACTCAAACCAAGTTACCTCCGGTGTTGCTCGAACAGGACCTCTTTTGGGATGATGAGGAGCTAACGTCTCTGCTGGCCAAAGAGCGTGAAAACCAACTCTATACGTTACTGGAAACCAACCCTCTTCTCTCCGACGCTCGCAGAGAATGCGTAGAGTGGATTCTGAAAGTGAATGCCCACTACTCTTTCTCTGTCCTCACCGCTGTTCTCGCCGTAAACTACCTCGACAGGTTCCTGTCCCACTTCCAGGTTCAGGATGGAAAGCCTTGGATGACCCATCTTGCTGCCGTCGCTTGTCTTTCCCTCGCCGCCAAGGTGGAGGAGATCCATGTCCCTCTTTTACTCGACCTTCAGGTGGAGGACAGCAGATACCTGTTCGAAGCCAAAACCATAAAAAGGATGGAGATTTTGGTGCTTTCCACTCTTGAGTGGAAGATGAATCCGGTGACACCACTATCGTTTCTTGATTACATCACTCGGAGACTGGGCCTAAGGGATTATCTCTGCTGGGAGTTCCTCAGGAGGTGCCAAGGCATTATTCTGTCAGTCATTACAGATATGAGGTTTATGCGTTATCTTCCTTCTGTGGTGGCGACTGCGACTATGATGCACGTAGTGAATGGCGTGGAAGCCGGCCTGGGAATGGAGTACAGAAACCAGCTGCTGGGTATTCTCGGAATCGACAAGGACAAGGTGGAGGAGTGCCACGAGCTCATAATGGAATTCACGACAGAATTCCAGGTGAAGCAATCCAACAAGCGTGCGTTTGGTTCCCTTCCCGGAAGTCCAAACGGCGTGATGGATGCGTCGTTCAGCTGCGACAGCTCCAACGATTCGTGGGCCGTAGCTGCGTCTGTTTCGTCGTCGCCGGAGCCTCTCTCCAAGAAGGCCAGGACTCAAGATCAGCTTCTTCTAAACCATCCTAATTCAGAATTCCTCAGTATTCCCCCCGCTCCCCGCATCTAA 1113 0.5085 MAHHQHQLDNPRFHLDALYCSEEHWEEQTGPEYFQQELEQVDECYLGCDTQTKLPPVLLEQDLFWDDEELTSLLAKERENQLYTLLETNPLLSDARRECVEWILKVNAHYSFSVLTAVLAVNYLDRFLSHFQVQDGKPWMTHLAAVACLSLAAKVEEIHVPLLLDLQVEDSRYLFEAKTIKRMEILVLSTLEWKMNPVTPLSFLDYITRRLGLRDYLCWEFLRRCQGIILSVITDMRFMRYLPSVVATATMMHVVNGVEAGLGMEYRNQLLGILGIDKDKVEECHELIMEFTTEFQVKQSNKRAFGSLPGSPNGVMDASFSCDSSNDSWAVAASVSSSPEPLSKKARTQDQLLLNHPNSEFLSIPPAPRI 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00034 370 FunFam D6-type cyclin 79 196 - -
Pral3970g00034 370 SMART cyclin_7 101 189 IPR013763 -
Pral3970g00034 370 Gene3D - 88 196 - -
Pral3970g00034 370 SUPERFAMILY Cyclin-like 64 196 IPR036915 -
Pral3970g00034 370 Gene3D - 197 287 - -
Pral3970g00034 370 FunFam CYCLIN D32 197 286 - -
Pral3970g00034 370 Pfam Cyclin, C-terminal domain 198 320 IPR004367 -
Pral3970g00034 370 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Pral3970g00034 370 CDD CYCLIN_AtCycD-like_rpt2 198 288 - -
Pral3970g00034 370 Pfam Cyclin, N-terminal domain 87 196 IPR006671 -
Pral3970g00034 370 SUPERFAMILY Cyclin-like 181 296 IPR036915 -
Pral3970g00034 370 SMART Cyclin_C_2 198 324 IPR004367 -
Pral3970g00034 370 PANTHER CYCLINS 77 290 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00034 Pral-Chr3970 264569 266399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00034 13 303 Core Cell Cycle Gene Families AT4G34160 50.676 1.55e-97 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00034 K14505 - cave:132184095 469.544