Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00029 ATGGCTGTGGAGCTTATATCTGGTTATGGGGATGATAGTTTTGCAGGCAGGACGGAAGTAGACAACACAGTCGCGGTGCAGGAAGCTACGGCTGCGGGCATTCACAGCGCCGAGAAGCTCATGACAATCATTTCTCAGCAGCGCCAGCACCTAGAGGAGGAGGCCTCTAGCTCCCGAGGAGGGCCTTCGGAACTGGAAGTTCTAGCAGATGCGGCGATGAACAAGTTCAAAAGGGTCATTTCTCTGTTGGATAGGCCAAGAATTGGCCACGCTCGTTTCAGAAAAGCTCCTACGACGCAGGTTTCGATTCCTTTTCGCCGGCCGCAGCAGACGCCGGATTCCGAAAACGCAGTGCCTCCTGTTACAGAACTCCAACAGAACAAAACAGAACAACCCTCTGCTTTTAAGGTCTATTGCCCTACGCCGGTTTTGCGTCTCCCACCTCTGCCTCACCAGGCGCACCAACCTTCCCCCTTTCATCGGGCGGAGAAGAAGGATGCGAATGGCAGTGCCCAATTTTCGGCGTCGCCCCCCATTTCCGCTGCCAATTCGTATGTGTCTGCGTTAACAGGGGATACGGATAGTATGCAACGCTCTTGTCATTCTTCGGGGTTCCAAATCATTCAGTGTCAGAGATCACATCAAGGATCCTACATGGGCAAGCCGCCTTTGTGTTCGACTTCTTTAAAGAGGAAGTGCAACTCAATGGACGATGCCGGTCTCAAGTGCGGATCATCCTCTGGCCGCTGCCATTGCTCCAAGAAAAGGAAATCAAAGATAAGGAGAGTAATCAGAGTACCGGCAATCAGCTCGAAGATGGCTGATATTCCGGCCGATGAATATTCGTGGAGAAAATATGGACAAAAGCCCATCAAGGGTTCTCCTCACCCCAGGGGTTATTACAAGTGTAGCAGCGTGAGGGGCTGCCCGGCTCGCAAACACGTGGAGCGTGCTCTGGACGATCCCGCCATGCTCATTGTCACCTACGAAGCTGATCATAATCACTCGCTCGAGGTTGCAGCCGCCGTCGTCCTCGAATCATCCTAG 1047 0.5301 MAVELISGYGDDSFAGRTEVDNTVAVQEATAAGIHSAEKLMTIISQQRQHLEEEASSSRGGPSELEVLADAAMNKFKRVISLLDRPRIGHARFRKAPTTQVSIPFRRPQQTPDSENAVPPVTELQQNKTEQPSAFKVYCPTPVLRLPPLPHQAHQPSPFHRAEKKDANGSAQFSASPPISAANSYVSALTGDTDSMQRSCHSSGFQIIQCQRSHQGSYMGKPPLCSTSLKRKCNSMDDAGLKCGSSSGRCHCSKKRKSKIRRVIRVPAISSKMADIPADEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLIVTYEADHNHSLEVAAAVVLESS 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00029 348 SMART WRKY_cls 277 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3970g00029 348 SUPERFAMILY WRKY DNA-binding domain 275 336 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3970g00029 348 Gene3D WRKY domain 264 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral3970g00029 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 26 338 IPR044810 GO:0003700
Pral3970g00029 348 Pfam Plant zinc cluster domain 230 275 IPR018872 -
Pral3970g00029 348 ProSiteProfiles WRKY domain profile. 272 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3970g00029 348 Pfam WRKY DNA -binding domain 279 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral3970g00029 348 FunFam WRKY transcription factor 65 261 338 - -
Pral3970g00029 348 Coils Coil 34 54 - -
Pral3970g00029 348 MobiDBLite consensus disorder prediction 152 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00029 Pral-Chr3970 222856 224936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00029 1 298 WRKY Transcription Factor Family AT4G24240 44.136 5.04e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral3970g00029 WRKY 3.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00029 - - qsa:O6P43_016034 385.571