Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00028 ATGAACAGGGTTCCTCCCAAAATTCTAGTTTCAACTTTGTACCTCCTCTTATTGTCCTTTCCCGTCCAAACTCTACCGCATGTTGCTGACACGGGTACACTCAATTTCAACAGTGGCTACAACAGCCAAGGTGGTGAAGGTGAGATTTTCGGCAAAAGCTGCAACAATGAATTCCAATCAATACCTCTCTCTTCCCCATGTCAAAAATCAAAAACCACAAAAGCATCTCCAGTTTTTCCTCTCCAAACAGACGGTTTGGTTTTTGCAGATCAGAGACTTGAAGTTGTATACCCAGTGATCCAAAAATTCAAGTCCAGCATCACCTCTGATCCCCTAGGAGTCACCAAATCATGGGTAGGCTCTGATGTTTGCAGCTACAAAGGTTTCTACTGTGATAATCCCCCAGACAACGCCTCAGCCATTGCCGTGGCCTCCATTGATTTCAATGGGTTTCAACTTGGAGCTCCTACACTTGATGGCTTCATTGATCAGCTTCCTGATGTTGCACTCTTCCATGCAAATTCCAACAATTTTAGAGGCACCATCTCTACTAAAATCTCCAAGCTCCCTTATCTTTATGAGCTTGATGTAAGCAACAATCAGCTGTCTGGTCCATTTCCCATGGCTGTCTTGGGCATGAACACCCTAACATTCTTGGACATTCGTTTTAACTTGTTCTCTGGGCAAGTCCCTCCCCAGATATTCACCCAGAATCTCGATGTCCTCTTCATCAACAACAACGACTTTACTCAGAGATTGCCTGATAACTTAGGCAGCACTCATATTCTTTATCTCACCTTAGCCAACAACAAATTCATGGGTCCTATACCTAGAAGCCTCCCCAAAGCTTTGTCCACTCTCACCGAGGTATTATTCTTGAACAACCAGTTAACAGGCTGTATCCCATATGAGATTGGGCTTCTTGAAGAGGCTAGAGTGTTTGATGCTGGGAACAACCAGTTAACAGGTCCACTGCCCATGTCCTTGGGTTGCCTTGAGCAGTTGGAAATCCTCAATTTGGCTAATAATCTCCTCTATGGTATGGTACCAGAAGTGGTGTGTGGACTAGAGAATTTGATCAACTTATCACTTTCAGATAATTATTTCATGCATGTAGGACCTTTGTGTAGAACCTTAATTCAGCGAGGGGTTCTTGATATTAGGAACAACTGCATTCCTGATCTTCCATTGCAGAGATCAGTGTTTGAGTGTGCAGATTTCTTTGCGCGTCCCAGAATGTGTTCCCACATGTGGTTTCATAGTTTCATTCCTTGTAAGTTTTCTTTTCACCACAAGTCCTCGGTCTCTGCCATTCCTAAGATGGCTCCTTCTCCTTGA 1338 0.438 MNRVPPKILVSTLYLLLLSFPVQTLPHVADTGTLNFNSGYNSQGGEGEIFGKSCNNEFQSIPLSSPCQKSKTTKASPVFPLQTDGLVFADQRLEVVYPVIQKFKSSITSDPLGVTKSWVGSDVCSYKGFYCDNPPDNASAIAVASIDFNGFQLGAPTLDGFIDQLPDVALFHANSNNFRGTISTKISKLPYLYELDVSNNQLSGPFPMAVLGMNTLTFLDIRFNLFSGQVPPQIFTQNLDVLFINNNDFTQRLPDNLGSTHILYLTLANNKFMGPIPRSLPKALSTLTEVLFLNNQLTGCIPYEIGLLEEARVFDAGNNQLTGPLPMSLGCLEQLEILNLANNLLYGMVPEVVCGLENLINLSLSDNYFMHVGPLCRTLIQRGVLDIRNNCIPDLPLQRSVFECADFFARPRMCSHMWFHSFIPCKFSFHHKSSVSAIPKMAPSP 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00028 445 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 61 428 - -
Pral3970g00028 445 Gene3D Ribonuclease Inhibitor 261 405 IPR032675 -
Pral3970g00028 445 Gene3D Ribonuclease Inhibitor 98 259 IPR032675 -
Pral3970g00028 445 Pfam Leucine rich repeat N-terminal domain 101 132 IPR013210 -
Pral3970g00028 445 SUPERFAMILY L domain-like 101 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00028 Pral-Chr3970 217810 220668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00028 86 413 Leucine-rich Repeat extension Gene Families AT3G24480 43.598 1.33e-87 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00028 - - gmx:100789584 635.18