Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3970g00027 ATGAAGCCATTTCATGAGGTGCAAATTGGTGCTCATTCCTTTACATTTGATCATGTTTACGGGAGTACGGGTTCTCCTTCATCCGATATGTTTGAAGAATGTGTTGCTCCCCTTGTTGATGTTTTATTCCAAGGATATAATGCCACTGTTCTCGCGTATGGTCAGACAGGTTCAGGGAAAACATACACCATGGGCACTGGTTTTAAAGATGGTTGCCAAACAGGCATAATACCCCAAGTCATGAATGTTTTGTTCAGCAAAATTGAGACTTTAAAGGATCAGATTGAATTTCAGCTACATGTTTCCTTCATTGAGATTCTTAAAGAAGAAGTACGAGACTTGTTGGATCCTTCTTCCATGAGCAAACAAGAAGCTGCTAATGGACATGGGGGAAAAGTGACAGTCCCTGGGAAACCTCCCATACAAATTCGTGAGACATCAAATGGTGTTATTACGCTGGCTGGATCTACTGAAGTAAGTGTTTCAACATTGAAAGAAATGGCTGCTTGCCTGGAACAAGGATCATTGAGCAGAGCCACTGGGAGCACAAATATGAACAACCAATCCAGTCGTTCGCATGCCATCTTCACCATCACATTAGAGCAAATGCGTAAACTCAATGGCGTCAATCCTCGCGAGAACAGTTTAAATGGGTCCATGAATGACGAGTATCTATGTGCTAAGTTGCACCTTGTGGATCTTGCTGGCTCAGAACGAGCTAAAAGAACAGGCTCTGATGGTTTGCGTTTTAAGGAAGGAATTCATATTAACAAGGGCCTCCTGGCCCTTGGTAATGTTATTAGTGCACTTGGTGATGAAAAGAAGCGAAAGGAAGGTGTTCATGTTCCTTACAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTCGGTGGTAACAGCAGAACTGTTATGATAGCTTGCATAAGTCCTGCTGATATTAATGCGGAGGAAACCCTCAACACTTTGAAGTATGCAAATCGTGCCCGTAATATTCAAAATAAACCTGTTATCAACAGAGATCCCATGTCCAGTGAGATGCTGAAAATGAGACAACAACTAGAGTATTTGCAAGCTGAACTTTGTGCTCGTTCTGGGGGCTCTCCTGAGGAAGTTCAGGTCCTCAAGGAAAGGATTGCTTGGCTTGAAGCTGCTAATGAGGATCTTTGCCGGGAACTTCACGAATACCGCAGTAGATGTTCTGTTGTAGAACAATGTGAAAAGGATGCTCATGATGGTAGCACATGCATTGTCAAGACTGAAGGGCTAAAGAGGAGCTTTCCTATAGTAGCATCTGATTATTCAATGAATGAAACAACAGCAGGTGATTCAAGAGAAATCGAAGAAGTGGCAAAAGAATGGGAGCACACACTGCTGCAAAATAGTATGGATAGAGAGTTACATGAGTTGAATAAACGCTTGGAGCAGAAAGAGACTGAAATGAAGCTTTTTGGAGTGTCGGATGCCGAAACACTCAAGCAGCACTTTGGAAGGAAAATAATGGAGTTGGAGGATGAAAAGAGAACTGTCCAGCGAGAGAGGGATCATCTTTTAGCTGAGGTTGAAAATCTTTCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATGTCCATGCACAAAAATTGAAATCACTTGAAGCACAGATTCTGGATTTGAAGAAGAAACAAGAGAGCCAAGTCCAACTTCTGAAGCAGAAGCAAAAAAGTGATGAAGCGGCGAAGAGACTGCAAGATGAAATACAATCTATAAAAGCACAGAAGGTTCAGTTGCAACAAAGGATTAAGCAAGAGGCAGAACAATTCAGGCAGTGGAAGGCTTCTAGAGAGAAAGAGCTCCTGCAATTGCGAAAGGAAGGAAGGAAAAATGAGTATGAAAGACATAAGCTACAAGCTTTAAATCAGCGCCAAAAAATGGTCCTTCAAAGAAAGACTGAAGAAGCTGCCATGGCCACCAAAAGGCTAAAGGAGTTGTTAGAAGCTCGTAAATCTTCCTGCCGGGATACTTCAGCTATTATCAGTGGAAGTGCAACAAATGGACAGAGCAATGAGAAGTCCTTACAACGGTGGCTTGATCATGAGCTAGAAGTCATGGTGAAAGAGCATGAAGTCCGTTTTGAGTATGAGAAGCAGAGCCAAGTGAGAGCTGCTCTTGCTGAAGAGTTAGCCATACTGAAGCAAGTGAATGAATTTGCTGCAAAAGGCCTCACTCCTCCAAGAGGAAAAAATGGTTTTGCTAGAGCATCCTCCATGTCACCAAATGCTAGAATGGCCAGAATAGCTTCGCTTGAGAGCATGCTGAGCATATCATCTAATTCACTAGTGGCAATGGCTTCTCAACTTTCAGAGGCAGAAGAAAGAGAAAGAGCCTTCACTAATCGTGGACGCTGGAACCAATTGCGCTCAATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCTGTTGGAGATGCTAGATGCCAACTGTGGGAGAGAGACATGGAGATCAGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGCCTATTACGGCAGAGTGAGATGAAGCGAAAGGAAGTTGAGAAAGAGCTGAAATTGAGAGATCAAGCTTTGGCGACCACATTGGCTACGCCAGCTTCAGGAAACTCGCCAAATTCATTGAAACACTACGTTGAAGATATGAATGGATCATTATCTCCAGCGTCTGTGCCAGTACCGAAACAGCTCAAGTATACCCCAGGAGTTGTTAATGGCATAGCAGGGGAATCTGCTGCATTTATAGATCAGAGTAGAAAGTTGGTACCCATGAGGCAGCTATCAATGAAAAAACTAGCCATTGTAGGACAAGCTTCGGGGAAGTTATGGAGGTGGAAAAGAAGTCATCACCAATGGTTGGTGCAATTCAAATGGAAGTGGCAAAAGCCGTGGAGGCTTTCAGAATGGATTCGCCACAGTGACGAGACTATTATGAGAGCAAGGCCGCGGCCACAGGCTTTGCCACGTACACTATGA 2997 0.4318 MKPFHEVQIGAHSFTFDHVYGSTGSPSSDMFEECVAPLVDVLFQGYNATVLAYGQTGSGKTYTMGTGFKDGCQTGIIPQVMNVLFSKIETLKDQIEFQLHVSFIEILKEEVRDLLDPSSMSKQEAANGHGGKVTVPGKPPIQIRETSNGVITLAGSTEVSVSTLKEMAACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLNGVNPRENSLNGSMNDEYLCAKLHLVDLAGSERAKRTGSDGLRFKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSSEMLKMRQQLEYLQAELCARSGGSPEEVQVLKERIAWLEAANEDLCRELHEYRSRCSVVEQCEKDAHDGSTCIVKTEGLKRSFPIVASDYSMNETTAGDSREIEEVAKEWEHTLLQNSMDRELHELNKRLEQKETEMKLFGVSDAETLKQHFGRKIMELEDEKRTVQRERDHLLAEVENLSANSDGQTQKLEDVHAQKLKSLEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEIQSIKAQKVQLQQRIKQEAEQFRQWKASREKELLQLRKEGRKNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSCRDTSAIISGSATNGQSNEKSLQRWLDHELEVMVKEHEVRFEYEKQSQVRAALAEELAILKQVNEFAAKGLTPPRGKNGFARASSMSPNARMARIASLESMLSISSNSLVAMASQLSEAEERERAFTNRGRWNQLRSMGEAKNLLQYMFNSVGDARCQLWERDMEIREMKDQIKELVGLLRQSEMKRKEVEKELKLRDQALATTLATPASGNSPNSLKHYVEDMNGSLSPASVPVPKQLKYTPGVVNGIAGESAAFIDQSRKLVPMRQLSMKKLAIVGQASGKLWRWKRSHHQWLVQFKWKWQKPWRLSEWIRHSDETIMRARPRPQALPRTL 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3970g00027 998 Coils Coil 536 608 - -
Pral3970g00027 998 PRINTS Kinesin heavy chain signature 183 200 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00027 998 PRINTS Kinesin heavy chain signature 282 303 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00027 998 PRINTS Kinesin heavy chain signature 228 246 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00027 998 PRINTS Kinesin heavy chain signature 45 66 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00027 998 Coils Coil 493 527 - -
Pral3970g00027 998 Coils Coil 641 661 - -
Pral3970g00027 998 Coils Coil 831 858 - -
Pral3970g00027 998 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 363 IPR027417 -
Pral3970g00027 998 Gene3D Kinesin motor domain 3 360 IPR036961 -
Pral3970g00027 998 ProSitePatterns Kinesin motor domain signature. 227 238 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pral3970g00027 998 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 6 989 IPR027640 GO:0003777|GO:0007018
Pral3970g00027 998 CDD KISc_KIF4 6 333 - -
Pral3970g00027 998 FunFam kinesin-like protein KIN-4A isoform X1 2 360 - -
Pral3970g00027 998 SMART kinesin_4 1 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00027 998 Coils Coil 460 480 - -
Pral3970g00027 998 MobiDBLite consensus disorder prediction 121 141 - -
Pral3970g00027 998 Pfam Kinesin motor domain 9 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pral3970g00027 998 Coils Coil 372 392 - -
Pral3970g00027 998 ProSiteProfiles Kinesin motor domain profile. 1 332 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3970g00027 Pral-Chr3970 204625 215489 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3970g00027 16 356 Calmodulin-binding Proteins AT5G65930 35.484 6.04e-53 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3970g00027 - - gmx:100786770 1711.04